Pandoraea sp. XY-2: DRB87_10575
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Entry
DRB87_10575 CDS
T06086
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00630
Glyoxylate and dicarboxylate metabolism
pand00680
Methane metabolism
pand01100
Metabolic pathways
pand01120
Microbial metabolism in diverse environments
pand01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DRB87_10575
09102 Energy metabolism
00680 Methane metabolism
DRB87_10575
Enzymes [BR:
pand01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
DRB87_10575
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_6
Fer4_Nqo3
Fer4_9
Fer4_2
Fer4_15
Fer4_4
Fer4_16
Fer4_NDSU1
Motif
Other DBs
NCBI-ProteinID:
QBC31721
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All DBs
Position
2306466..2309351
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AA seq
961 aa
AA seq
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MMHPSTSVTPGHDLDMGTPLRESDVGITLEIDGERVTVPAGTSIMRAAAGRDVNIPKLCA
TDSLEPFGSCRLCLVEIEGRRGFPASCTTPVEPGMKVRTQSPALQDLRRNVMELYISDHP
LDCLTCAANGDCELQDMAGVTGLREVRYGFEGENHIHSAKDESNPYFTYDPSKCIVCNRC
VRACEETQGTFALTISGRGFEARVSAGQDQPFMDSECVSCGACVSACPTATLQEKSVIEM
GQPEHAVVTTCAYCGVGCAFKAEMKGGDVVRMTPYKDGGANEGHACVKGRFAWGYATHKE
RITKPMIRSKITDPWREVSWDEALDYAASEFRRIQATYGRDAIGGITSSRCTNEETYLVQ
KLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFKSIEHSDVILVMGANPTDGH
PVFASRLKRRVREGANLIVIDPRRIDIVDGPHVKAAFHLPLRPGTNVAMVNALAHVIVTE
GLLAEDFIAERCEDRAFAQWRDFVALPENSPETVSVVTGVDAEQIRGAARLYATGGNAAI
YYGLGVTEHVQGSTAVMGIANLAMATGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPG
YRHVSDTLVRESFEAAWGVTLHAEPGLRIPNMFDAAVQGSFKGLYCQGEDIVQSDPNTQH
VAAAMEAMECLVVQDIFLNETAKYAHVLLPGTTFLEKDGTFTNAERRISRVRRVMAPLPG
MADWEVTIALAKRLGYDMPYTHPSQIMDEIARLTPTFSGVSYARLDEAGSLQWPCNDEAP
DGTPIMHVHEFVRGKGRFIITRYVPTDEKVTPRYPLLLTTGRILSQYNVGAQTRRTHNVA
WHDEDRLEIHPVDAEDRGIKDNDWVGIRSRAGETVLRAVISERMQPGVVYTTFHFPESGA
NVITTDNSDWATNCPEYKVTAVQVLPVVQPSAWQSEYSTFNRTQLALLDAAHMPSEPVPA
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatccgagcacctcagttaccccgggccacgacctggacatgggcacgccgctg
cgcgagagcgatgtcggcattaccctcgaaatcgacggcgagcgcgtgaccgtgccggcc
ggcacgtcgatcatgcgggcggcggcgggccgcgacgtcaacatccccaagctctgtgcg
acagattcgctcgaaccgttcgggtcttgccgcttgtgtctggtcgagatcgaggggcgg
cgcggatttcccgcttcgtgtacgacacccgtcgagccgggcatgaaggtacgcacgcag
tcgccggcgctgcaggatctgcgtcgcaacgtgatggagctttacatctccgatcacccg
ctcgactgcctgacctgcgcggccaacggcgattgcgaattgcaggacatggcgggcgtc
acggggctgcgcgaggtgcgctatggctttgagggcgagaaccatattcacagcgcgaag
gacgagtcgaatccgtatttcacgtatgacccgtcgaaatgcatcgtctgcaaccgttgt
gtgcgggcgtgcgaggagacgcagggcacgtttgcgctgacgatttccggccgcggcttc
gaggcgcgggtctcggccgggcaggatcagccgttcatggattcggagtgtgtgtcgtgc
ggcgcatgcgtgtcggcctgcccgacggcaacgctgcaggaaaaaagcgttatcgagatg
gggcagcccgagcacgcggtggtgaccacgtgcgcgtactgcggtgtgggctgcgcgttc
aaggctgaaatgaagggcggggacgtggttcgcatgaccccctacaaggatggcggggcg
aatgagggccacgcctgcgtgaaggggcgctttgcgtgggggtacgcaacgcacaaggag
cgcatcaccaagccgatgatccgcagcaagattaccgatccgtggcgcgaggtgtcatgg
gacgaggcgctggactacgcggcgtcggagttccggcgcattcaggcgacgtacgggcgc
gatgccattggcggcatcacgtcgtcgcgttgcacgaacgaagagacgtatctcgtgcag
aagctggtgcgtgccgcgttcggtaacaacaacgtcgacacctgtgcgcgcgtgtgccat
tcaccgaccggttacgggctcaagcagacgcttggcgagtcggcgggcacgcagacgttc
aagtcgatcgagcactcggacgtgattctcgtgatgggcgccaatccgaccgatgggcat
ccggtatttgcctcgcgactcaagcgtcgtgtgcgcgagggggcgaacctgatcgtgatc
gatccgcggcgcatcgacatcgtcgacgggcctcacgtgaaggccgcattccacttgccg
ctgcgccccggaacgaacgtggcaatggtcaatgccctcgcgcatgtgatcgtcaccgaa
gggctgctggccgaggacttcatcgccgagcgctgtgaagaccgggccttcgcgcaatgg
cgcgacttcgtggcgctgccggagaattctcccgaaaccgtgtcggtcgtcaccggcgtg
gacgccgagcagatccgcggcgcggcgcgtttgtacgccacgggcggcaacgcggcaatc
tattacggactgggggtgaccgagcatgttcaggggtcgaccgcggtcatgggcattgcc
aacctggcgatggccacgggcaatgtcgggcgcgagggcgttggcgtgaacccgttgcgc
ggccagaacaatgttcaagggtcgtgcgacatggggtcgttcccccatgaactgcccggt
tatcgccacgtctccgatacgttggtacgcgagtcgttcgaggccgcttggggcgtcacg
ctgcacgccgagccggggctgcggattccgaacatgttcgacgcggcggtgcagggcagc
ttcaaagggctttactgccagggcgaggacatcgtgcagtccgacccgaacacgcagcac
gtggcggcggcgatggaggcgatggagtgcctcgtcgtgcaggatatcttcctgaacgaa
acggccaagtacgcgcacgtgctgctgccgggcacgaccttcctcgaaaaggacggcaca
ttcacgaatgcggagcggcgcatctcacgcgtgcgtcgggtgatggcgccgctgcccggc
atggcggactgggaggtgacgatcgcgctggcgaagcgactggggtacgacatgccttat
acgcatccgtcgcagatcatggacgagatcgcccgcttgaccccgacgttcagcggcgtg
agctacgcgcgtctcgatgaagccggcagtctgcaatggccgtgtaacgacgaggcgccc
gacggcacaccgatcatgcacgtgcacgagttcgtgcgcggcaagggacgcttcatcatc
acccgatatgtgccgacggacgagaaggttacgccgcgctacccactgctgctcaccacg
ggacgcattctctcgcaatacaatgtcggcgcacagacacgtcgcacgcacaacgtggcc
tggcacgatgaagaccggctcgaaattcacccggtcgatgcggaggatcgcggcatcaag
gacaacgattgggttggcatccgcagccgcgcgggcgaaacagtgctgcgtgctgtcatc
agcgagcgcatgcagccgggcgtggtgtacacgaccttccatttcccggagtcgggcgca
aacgtcatcacgaccgacaactcggactgggcgaccaactgtcctgagtacaaggtgacg
gccgtgcaagtgctgccggtggtacagccctccgcatggcagtcggaatattcgacattc
aaccgcacgcagctcgcgctgctcgatgcggcccatatgccctccgagccggtaccggcg
aagtag
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