Pandoraea sp. XY-2: DRB87_12355
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Entry
DRB87_12355 CDS
T06086
Name
(GenBank) hypothetical protein
KO
K07677
two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:
2.7.13.3
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DRB87_12355
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pand01001
]
DRB87_12355
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pand02022
]
DRB87_12355
Enzymes [BR:
pand01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
DRB87_12355
Protein kinases [BR:
pand01001
]
Histidine kinases
NarL family
DRB87_12355
Two-component system [BR:
pand02022
]
NarL family
RcsC-RcsD-RcsB (capsule synthesis)
DRB87_12355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
Response_reg
Hpt
PDE8A_N
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QBC31993
LinkDB
All DBs
Position
complement(2716872..2720240)
Genome browser
AA seq
1122 aa
AA seq
DB search
MTRDIAIAGRLLRVGGLLALLFGLSVWVAVVSYALFGMVWQGGQKTATFFATVGHEIRDV
EIFNEQASTMAQATLASNVRPGGVTQSLTDRILNPLLTMPVGTAKRVAGVGFDGDFQIVK
LAEIPTERAQRLARLTLRLMILDANFWSALGGQDETFIISADGAFAARRTSFDLQSVGAT
DLARDTNATLAEINKVERYATRRPTSNDGPFWTYNYQNALSGLTAVSSFVPIRDLDGHLM
AYVGTSMAPDRIVPPRLRTLEHTGEALQLVSADGFVVASAGASLSSLGHLRTLATLPLFG
DAQMAVRYDGERLVFERHLASSPWFVRYAVRPIDLLQQNATLLIGATLLLCLYAAAVYAG
MRYMRQRMIEPARRRTTALLERDAFTQTLIETAPVGMAIIDPFEPSVVMSNPAYAGTVDL
LRHLGDGELTRMYRQLHSGVVARPVRRLLSAIDDAGERHYAVSFVDTVFREQSVLIATLS
DVTEQRRFELEQRKARLAAESANRAKDVFLTTVSHEMRTPLYGTLASLELLSAQRLGDDH
RYYVDVMESSTRNLLDLINDLLDYSRIQVGRFELNSRDGSLLKELEAIGLSFTGRARLQG
LTLDWMIDPQLSRAVHTDALRLGQVVTNLVGNAIKFTEKGYVAFSAMVTRTDPQGCDVAF
SVSDSGVGIAPADLADLFRPFGKSTSEPGMQHGTGLGLAISHQFVGMLGGVLQVDSQQGE
GTTMRFTLRLPWASDSDMLPVVGRGETFAYVSGLTRRHAYLDALIRRAGYLPVRYDDAVS
WSSGSGRAQDAGLLMFADEWPVRGMAGSEVYLLRSTPVDRPAGSAPAWPRDIALFQQAEL
WDALGLVSAPGLAASGDLPGAPGAQARIKPLAGWYVLVADDHPISGMLLSRQLEGLGAMV
DCYHDPREALDAFDAESHMLVITDANMPHLSGHALATQIKARAAHVPVIVATADVTMRTD
RDETSPFDAIVYKPVDARSLLRVIELVRARYPSLCVDIAPLPASSDQIDGGPTPSSDSTS
AKDWRPPLSDMLDTFVKIADQDIANCRAALVDPSRDTLRHSAHRLRGGFMAFGLSSLASL
AAQVEHLAPQASVGQMESAFDVLDAAWNDWLRAQGHAIANDA
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtgacatcgcgattgccggccgcttgctacgtgtcggtggcttgctggccctg
ctatttggtttgtcggtctgggtcgctgtggtgtcctacgcgttgttcggcatggtctgg
caaggggggcagaagacggccacgttcttcgcgaccgtcggccacgagatccgcgacgtc
gaaattttcaacgagcaggccagtacgatggcgcaagccacactggcgagcaacgttcgg
ccgggcggtgtcacacaatcactcaccgaccggattctgaacccgctgctcaccatgccg
gtcggcacggcgaagcgcgttgccggcgtggggttcgatggcgacttccagattgtcaag
ctggcggagatcccgactgagcgagcgcagcgattggcgcgccttacccttcggttgatg
attctcgatgccaacttctggagtgcgctgggtgggcaggacgaaaccttcatcatctcg
gcggatggcgcgtttgccgctcgccgcacgtcgttcgacctgcagtccgtcggcgcgacg
gatctcgcgcgcgacaccaacgcgacgctcgccgagatcaacaaggtcgagcgttatgcc
acgcgtcgtcccacgagcaacgacggtccgttctggacctacaactaccaaaatgcactt
tccggtttgacggcggtctcgagcttcgtgccgattcgcgatctcgatggtcatctgatg
gcctacgtcggcaccagcatggcgcccgacagaattgtgccgccgcggctgcgaacgctg
gagcacacgggcgaggccctccaattggtgtccgcggacgggttcgtggtggcaagcgcc
ggcgcgtcgctttcgtcgttggggcatctgcgtacgctcgccacgttgccgctctttggt
gacgctcaaatggcggtgcgttacgacggcgagcgtctggtcttcgagcgtcatctggcg
tcgtcgccgtggttcgtccggtatgccgttcgtccgatagatttactgcagcaaaatgcc
acgctgctgatcggcgcgacgttgctgttgtgtctctatgcggcggccgtttatgcgggc
atgcgctacatgcgccagcgaatgatcgagccggcgcgtcgacgtacgacggccctgctc
gaacgagacgccttcacgcagaccctgatcgagacggcccccgtcggcatggcgatcatc
gatccgttcgagcccagtgtggtgatgagcaatccggcgtatgcgggcactgtcgatttg
cttcgacatcttggcgatggcgagttgacgcgcatgtaccgccaactgcacagcggtgtg
gtggcgcgtccggtgcggcgtttgctgagcgcgatcgacgatgccggcgagcgtcactac
gccgtgagcttcgtcgataccgtctttcgtgaacagtcggtgctcatcgccacactgtcc
gacgtgacagagcaacgccgcttcgaactggagcaacgcaaggcgcggcttgccgccgag
agcgccaatcgcgccaaggatgtgttcctgacgaccgttagccacgaaatgcgtacgccg
ttgtatggcacgctcgcgtcgctcgaactgctgagcgcgcagcgtctgggcgacgatcat
cgctattacgtcgatgtgatggaaagttcgacgcgcaatctgctcgatctcatcaatgat
ctgctggactattctcggattcaggtcggtcgctttgaactgaatagccgcgatggctcg
ttgctaaaggagctcgaagccatcggcttgtcgtttacgggacgtgcgcggttgcaggga
ctcacgctggactggatgatcgacccgcagctctcgcgtgccgtgcatacggatgcgctg
cgactcggacaggtggtgacaaatctcgtcggcaatgccatcaagttcaccgagaaaggg
tacgtcgccttcagcgccatggtgacgcgcactgatccgcagggctgtgacgtggccttc
tcggtcagcgacagtggcgttggcattgcgcccgccgatctggcggacttgttccggccg
ttcggcaagagtacgtcggagccgggcatgcagcatggcaccggactggggctggcgatc
tcgcatcagttcgtgggtatgctcggcggcgtgctgcaggtcgacagtcagcagggcgag
ggcacgaccatgcgcttcacgctccgcctgccctgggcgtcggacagcgacatgttgccc
gtcgtcgggagaggcgagacgtttgcgtatgtgagcggactcactcgccgccatgcgtat
ctcgatgcattgatccgccgggcgggttacctgccggtcaggtatgacgacgcggtatcg
tggtcttcgggtagtggccgcgcccaggacgcgggcttgctcatgtttgccgacgaatgg
ccggtgcgtggtatggcgggctcggaggtgtatctgctgcgctcgacaccggtcgatcgt
ccagccggcagcgcccccgcgtggccgcgagacatcgcattgttccagcaggcggagctc
tgggatgcgctcggcctggtgtcggcgcccgggctcgccgcgagcggtgacttgccgggc
gctcccggcgcgcaggcgcgtatcaagccgctggccggatggtacgtgcttgtcgcggac
gatcatccgatcagcggcatgttgctgtcccggcagctggaaggactgggcgcgatggtc
gattgctatcacgacccgcgcgaggcgcttgacgcgttcgatgcggaatcgcacatgctg
gtgatcaccgacgccaacatgccgcacctctccgggcatgcgttggctacgcagatcaag
gcgcgagcggctcatgtgccggtgatcgtcgcgacggccgacgtcacaatgcgcaccgac
cgtgacgagacgtccccgttcgacgccatcgtctacaagccggtggatgcgcgctcgttg
ttgcgcgtgattgaactggtacgggcgcgctatccctcgctgtgcgtggacatcgcgccg
cttccagcgtcatcggaccagatcgacggcgggccgacgccgtcctccgactcgacatcg
gcgaaggactggcggccaccgctgtccgacatgctcgacacgttcgtgaaaattgccgat
caggacatcgccaattgccgggcagcgttggtcgacccatcgcgcgacaccctgcgtcat
tccgcgcatcgtttgcggggcggtttcatggcattcgggctgagttcgctggcatcgctc
gcggcgcaggtggagcatctggcgccccaggcgtccgtcggacagatggaatcggcgttc
gacgtgctcgatgccgcgtggaacgactggctgcgtgcgcaggggcatgccattgccaac
gacgcctga
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