Pandoraea sp. XY-2: DRB87_12655
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Entry
DRB87_12655 CDS
T06086
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00071
Fatty acid degradation
pand00362
Benzoate degradation
pand00650
Butanoate metabolism
pand01100
Metabolic pathways
pand01120
Microbial metabolism in diverse environments
pand01200
Carbon metabolism
pand01212
Fatty acid metabolism
Module
pand_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DRB87_12655
09103 Lipid metabolism
00071 Fatty acid degradation
DRB87_12655
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DRB87_12655
Enzymes [BR:
pand01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DRB87_12655
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
DAO
ApbA
UDPG_MGDP_dh_N
Pyr_redox
Methyltransf_12
NAD_Gly3P_dh_N
TrkA_N
F420_oxidored
ThiF
GIDA
Ion_trans
NAD_binding_7
Cas_Cas1
Motif
Other DBs
NCBI-ProteinID:
QBC32040
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Position
complement(2781058..2783154)
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AA seq
698 aa
AA seq
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MSTVYEVRDGVAVITLDNPPVNGLGHATRAGIADGLAKAQADAQVRAVVLIGGGKAFSGG
ADIREFNTPKATQSPLLVDVIAALDACAKPVVAAVHAVAMGGGLELALACHYRVGLPGAQ
IALPEVKLGLLPGAGGTQRLPRAIGVARALDMVVTGRVVKSESLVGTLFSTVFEGNRDDL
LAGAIAFAGNIASQGGALPRLRDVALDDADGSAQAAIDAAREKVQREQPHFPAPQKCVAA
VEAALQRPFDDGVKFERECFVALVSSPESKALRHAFLGERAAAKIADVPDDTPVRNIERV
AVIGAGTMGSGIAMTFANAGIPVTLVDTTDAALARGIEAIRGNYARAVTRGKLAADDAQK
RQARIHGSTDFASVADADLIIEAVFEEMAIKQVVFRELDKVAKPGAILASNTSTLDLDAL
AATTSRAQDVVGMHFFSPANVMRLLEVVRGAQTGKDVLATVMKLAKRIGKLAVVARVCDG
FIGNRMLEPYFKQSQWMVEQGATPAQIDAAIERFGFAMGPFRTSDLAGNDVSWAIRKRRH
AEHPGIVYPKIADVVCEAGRFGQKTHAGWYDYAEGDRSPRESAKVGQMIDDYRKANGIAP
RPFSDDEIVDRLVYALVNEGAKVLADGTAARASDIDMVYLNGYGFPLWRGGPMHYADAVG
LDKVLARVREFAQDAHGEDWMPAARLVELADAGKRFNG
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggtttatgaggttcgtgacggcgtggccgtcatcacgctggacaatcccccg
gtgaatggcttgggacatgccacgcgcgctggcatcgccgacgggctcgcgaaagcccag
gccgacgcccaggtgcgcgccgtcgtactgatcggcggtggcaaggcattttccggcggg
gccgacatccgcgaattcaataccccgaaggcaacgcagagcccgctgctggtcgatgtg
attgccgcgctcgacgcctgcgccaaacccgtcgttgcggccgttcacgcggtggcgatg
ggcggcggactcgaattggcgctcgcctgccactatcgcgtggggttgcccggcgcgcag
atcgcgctgcccgaggtcaaactgggcctgctgcctggtgcgggagggacgcagcgcctg
ccgcgtgccatcggtgtggcacgtgcgctcgacatggtggtgacggggcgtgtggtgaag
tcggagtcgctcgtcggtacgctcttctcgacagtgtttgaaggcaaccgcgacgacctg
cttgcgggcgccatcgcgttcgccggcaacatcgcctcgcaaggcggcgcattgccgcga
ttgcgtgacgtggcgctcgatgacgccgacggctcggcgcaggccgcgatcgatgccgca
cgtgaaaaggtgcaacgcgagcaaccgcatttccccgcgccgcaaaaatgcgtggctgcc
gtcgaggcggcgctgcaacgcccgttcgatgacggtgtgaagttcgagcgcgagtgtttt
gtggcgttggtgagttcgccggagtcgaaggcgctgcgtcatgcgtttctcggcgagcgc
gcggccgccaagattgcggacgtaccggacgacacgccggtgcgcaacatcgagcgcgtg
gccgtcatcggggccgggacgatgggcagcggcatcgccatgacctttgccaacgcgggc
attccggtgacgctggtcgacacgaccgacgcggcgcttgcccgcggtatcgaagcgata
cgaggcaactatgcgcgtgccgtcacgcgtggaaaactcgcggcggacgacgcgcagaag
cggcaggcacgtattcatggcagtaccgatttcgcgtcggtggccgatgccgacctgatt
atcgaagcggtgttcgaggagatggccatcaagcaggtcgtgttccgtgagctcgacaaa
gtggccaagccgggggcaatcctggcgtcgaacacgtcgacgctcgatctcgatgccctg
gccgcgaccacgtcgcgggcgcaggacgtcgtcggcatgcacttcttcagcccggcgaac
gtcatgcgcttgctcgaagtcgtgcgcggtgcgcagaccggcaaggacgtgctggcaacg
gtcatgaagctggccaaacgcattgggaagcttgccgtggtggcacgcgtctgcgacggc
tttatcggcaatcgcatgctcgagccgtatttcaagcagtctcagtggatggtcgagcag
ggcgcgacgcccgcgcagatcgacgccgccattgagcgcttcggcttcgcgatggggccg
ttccgtaccagcgatctggccggaaacgacgttagctgggccatccgcaagcgccgacat
gccgaacatcccggcatcgtctatcccaagattgccgacgtcgtatgcgaagccggacgc
ttcggccagaagacgcacgccggttggtacgattacgccgagggcgatcgctcgcctcgt
gaatcggccaaggtcgggcagatgatcgacgactatcgcaaggcgaacggtatcgcgccg
cgccccttctcggacgacgagatcgtcgatcgcctcgtctacgcgctggtgaacgaaggg
gcgaaagtgttggccgacggcacggcggcacgcgcgtcggacatcgacatggtgtatctg
aacggctacggcttcccattgtggcgcggcgggccgatgcactatgccgatgcggtgggg
ctcgacaaggtgctcgcacgggtgcgcgagtttgcgcaagacgcgcacggcgaagattgg
atgccagccgcgcggctcgttgaacttgccgacgccggcaagcgcttcaacggataa
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