Pandoraea sp. XY-2: DRB87_14465
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Entry
DRB87_14465 CDS
T06086
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pand
Pandoraea sp. XY-2
Pathway
pand02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DRB87_14465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pand02000
]
DRB87_14465
Transporters [BR:
pand02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DRB87_14465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
QBC32316
LinkDB
All DBs
Position
complement(3181585..3182652)
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AA seq
355 aa
AA seq
DB search
MKTVVPQTLRKLARAAAISVGVAGTVFGASAAYADTTLYVGAYGGSFEQMLKKDVIPSFE
QANPGTKVVIVPGDSTTNLAKLQAQKGKAGMDVVFLDDGPMYQALQMGFCGKLADAPVYH
DLYDIAKFKGGNAVAAGLIATGIAYNTRVFQAKGWPAPTSWQDLSDPKYKGRLVMPSIKN
TYGLHGLLVESKINGGSDSNIEPGFRAMEKIAPNVLSFDPSPGKIAELFQSDEVAIAVWG
NGRVQALRQQGIPAEFVYPKEGAVALAMGMCVVDKSANEALAQKFVQMILSPQAQAILAE
SAGVAPSNKKTQLSMAVAARVPSPAQIDKLIRVDWDVVNAKRAEWTQRWNRQIER
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgtcgttccccaaacgcttcgcaagcttgcccgcgccgcggccatttcggtc
ggtgtcgccggaacggtattcggcgccagcgctgcctacgccgacaccacgttgtacgtc
ggcgcttacggtggttcgtttgaacagatgctcaagaaggacgtcattcccagtttcgag
caggcgaaccccggcacgaaggtggtgatcgtgcccggcgattcgacgaccaacctcgcg
aagttgcaggcgcaaaaaggcaaggccggcatggatgtcgtcttcctcgatgacggcccc
atgtaccaggccctccagatgggcttttgcggcaagctcgccgacgcgcccgtctatcac
gatctgtacgacatcgcgaagttcaagggcggcaacgccgtggcggccggcctgatcgcc
acaggcatcgcctacaacacgcgagtgttccaggcgaagggctggcccgcgccgacgtcg
tggcaggacctgtcggatccgaagtacaagggcaggctcgtgatgccgagcatcaagaac
acgtatggcctgcacgggctgctggtcgaatcgaagatcaacggcggcagcgacagcaac
atcgaaccgggcttccgcgcgatggagaagatcgcaccgaacgtgctgtcgttcgatccg
tcgccgggcaagatcgccgagctgttccaatcggatgaggtcgccatcgccgtgtggggc
aacggccgcgttcaggcgttgcgccaacagggcattccggccgagttcgtgtatccgaag
gaaggggcggtggcgcttgccatgggcatgtgcgtggtagacaagtccgccaacgaagcg
ctggcgcagaagttcgtccaaatgattctctcgccgcaagcccaggccattcttgccgaa
agcgcaggtgtcgcgccgtcgaacaagaagacgcaactctccatggcggtggctgcgcgc
gtgccgtcgcccgcacagatcgacaagctcatccgtgtcgactgggatgtcgtcaacgcg
aagcgtgctgaatggacgcagcgctggaaccgtcagatcgagcgttaa
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