Pandoraea sp. XY-2: DRB87_14900
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Entry
DRB87_14900 CDS
T06086
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand03030
DNA replication
pand03410
Base excision repair
pand03420
Nucleotide excision repair
pand03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DRB87_14900
03410 Base excision repair
DRB87_14900
03420 Nucleotide excision repair
DRB87_14900
03440 Homologous recombination
DRB87_14900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pand03032
]
DRB87_14900
03400 DNA repair and recombination proteins [BR:
pand03400
]
DRB87_14900
Enzymes [BR:
pand01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DRB87_14900
DNA replication proteins [BR:
pand03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DRB87_14900
DNA repair and recombination proteins [BR:
pand03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DRB87_14900
NER (nucleotide excision repair)
GGR (global genome repair) factors
DRB87_14900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QBC32385
LinkDB
All DBs
Position
complement(3281116..3283854)
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AA seq
912 aa
AA seq
DB search
MSEQQSLEGKTLLLVDGSSYLYRAYHALPDLRGPNGEPTGALHGIVNMLRRMRKDVHAEY
SACVFDAKGKTFRDDWYPEYKANRPSMPEDLRAQIEPIHEAVRAMGWPLLMIDGVEADDV
IGTLARQAAERGMRVVVSTGDKDLAQLVNDRVTLVNTMTNETLDAAGVAAKFGVPPERIV
DYLTLVGDTVDNVPGVDKCGPKTAVKWLTQYGDLDNLVANAAEVKGAAGENLRRALDWLP
MGRKLVTVALDCDLAPQVTSIDASLQSQPEDVETLRDFFVRHGFKTLLREAQAAVATQAG
EPAPAPVADTIAREYEAVLTWAQFDAWLKIIESAELTAFDTETTSLDAMQAQLVGLSLSC
EPGRAAYIPVAHRAPGDVDQLPRDEVLARLKHWLESPDHKKVGQNLKYDAHVLENYGIVL
RGIAHDTMLQSYVLESHRGHDMDGLASRHLGVTTIKYEEVCGKGAKQIGFDEVTVERATA
YAAEDADITLRLHRAIYPDVAREATLEFVYRDIEMPTARVLQRMERNGVLVDTARLAAQS
DEIGQKLVALEAEAYTLAGQQFNLNSPKQIGDIFFTQLQLPIVKKTASGAPSTDEEVLQK
LAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNASTGRVHTNYAQAVAITGRLASNDPNL
QNIPVRTAEGRRIREAFIAPQGSQLVSADYSQIELRIMAHISGDESLLRAFANGEDIHRA
TAAEIFAVTPIEVSTEQRRYAKVINFGLIYGMSAFGLAANLGIERDAAKQYIDRYFMRYP
GVARYMDETRKSAKARGYVETVFGRRLWLPDINGGNGPRRQAAERAAINAPMQGTAADLI
KLSMIAVQRWLDDSGLQTRQIMQVHDELVLEVPDHELAEVRKRLPELMCGVAKLRVPLVA
EVGVGENWEQAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacagcaaagtctggaaggtaagacgctcttattggtcgatggttcgagttat
ctctatcgagcctatcacgccctgccggatttgcgcggtcccaatggcgagccgacgggg
gcgcttcacggcatcgtcaatatgctgcgccgcatgcgtaaagacgtccacgcagagtat
agcgcctgcgttttcgatgccaagggcaagacgttccgggacgattggtaccccgaatac
aaagcgaatcgtccgtcgatgccggaagatctgcgcgcgcagatcgagccgattcacgag
gcggtgcgcgccatgggctggccgctgttgatgatcgatggcgtggaggccgatgacgtc
atcggcacgctggcaaggcaggcggccgagcgcggcatgcgcgtggtcgtctccaccggc
gacaaggatctggcgcaactcgtgaacgaccgcgtgacactggtcaacacaatgacgaac
gaaacgctcgatgccgccggcgtcgccgcgaaattcggcgtgccgcccgagcgcatcgtc
gattacctcacgcttgtcggcgacacggtcgataacgtgccgggcgtggacaaatgcggg
ccgaagacggccgtcaagtggctcacgcaatacggagatctcgacaatcttgttgcgaac
gccgcggaggtgaaaggggcggcgggcgaaaacctgcgccgcgcgctcgactggctgccg
atggggcgcaagctggtgacagtcgcgctcgattgcgatctcgcaccacaggtcacctcc
atcgacgcgagcctgcaatcgcagcctgaagatgtcgaaacgctgcgcgatttcttcgtg
cgtcacggcttcaagaccttgctgcgcgaagcgcaggccgccgttgccacgcaggccggt
gagccggcgccggcacctgtggccgacacgatcgcgcgagaatacgaagccgtgctgacg
tgggcgcagttcgacgcatggctgaagatcatcgagtcggccgagttgacggcattcgat
accgagaccacctcgctcgacgcaatgcaggcgcaactggttggcctgtcgttgtcctgc
gaaccgggacgcgccgcctacattccggtggcccatcgcgcgccgggcgatgtcgaccaa
ttgccgcgagacgaagtgctggcgcgtctgaagcattggctcgaaagtcctgaccacaag
aaggtcggacagaacctcaagtacgatgcccacgtgctggagaactacggcatcgtgttg
cgcggcattgcgcacgacacgatgcttcagtcgtatgtgctcgaatcgcaccgcggccat
gacatggacggcctggcctcgcgccatctcggcgtgacgacgatcaagtacgaagaggta
tgcggcaagggcgccaagcagatcggcttcgacgaagtcaccgtcgagcgcgcgaccgcc
tacgccgccgaagacgccgacatcacgctacgactgcaccgcgcgatctatcccgacgtg
gcgcgtgaagccacgctggagttcgtctaccgagacatcgaaatgcccacggcgcgcgtg
ctgcagcgcatggagcgcaacggcgtgcttgtcgacacggcccgtctggccgcgcagagc
gacgagatcggccagaagctggtcgcgctcgaagccgaagcgtacacactggccgggcag
cagttcaatctgaattcgcccaagcagatcggcgacattttcttcacgcagctgcaactg
ccgatcgtcaagaagacggcgagcggtgccccgtcgaccgacgaggaagtgctgcagaag
ctcgccgaagactatccgttgccgaaggtgctgctcgattaccgtggccttgccaagctc
aagtcgacgtacaccgacaagttgccgaagatggtcaatgcctcgaccggccgcgtgcac
acgaactatgcgcaggccgtggcgatcaccgggcgcctggcgtcgaacgatccgaatttg
cagaacattcccgtgcgcacggccgagggtcgccgcattcgcgaggcattcattgcacct
cagggcagccaactggtgtcggcggactactcgcagatcgagctgcgcatcatggcgcat
atctcgggcgacgaaagcctgctgcgcgcattcgccaacggcgaggacattcaccgcgcc
acggcggcggaaatcttcgccgtcacgccgatcgaggtgtcgaccgaacaacgtcgctac
gccaaggtcatcaacttcggtctgatctacggcatgagcgcgttcgggctggccgcgaac
ctcggtatcgaacgcgacgccgccaagcagtacatcgaccgctatttcatgcgctacccc
ggcgtggcgcgttacatggacgagacgcgcaagagtgcgaaggcgcgcggctatgtcgaa
acggtcttcggacgccgtctgtggctaccggacatcaatggcggcaacggaccgcgccgc
caggccgccgagcgtgccgccatcaatgccccgatgcagggcacggccgccgatctcatc
aaactctcgatgatcgccgtgcagcgctggttggacgacagcggcctgcagacgcgtcag
atcatgcaggtgcacgatgaactggtgctcgaagtgcccgaccatgaactggccgaggtt
cgcaagcgtttgccggaactgatgtgcggcgtggcgaagttgcgcgtgcccctcgtggcc
gaagtcggcgtgggcgagaattgggaacaggcccactga
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