Pandoraea sp. XY-2: DRB87_17535
Help
Entry
DRB87_17535 CDS
T06086
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DRB87_17535 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pand03400
]
DRB87_17535 (recC)
Enzymes [BR:
pand01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DRB87_17535 (recC)
DNA repair and recombination proteins [BR:
pand03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DRB87_17535 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QBC32784
LinkDB
All DBs
Position
complement(3883214..3886639)
Genome browser
AA seq
1141 aa
AA seq
DB search
MLHLFFSNRFTTLEAALLRDLAQAPGSTGKAGNPFETETIVVPSVAVRRRLELDYADVFG
VCANVRLTYLAQWLWDMAGQLVTVPESSPFAPDRLVWPLYQCLAQPWGDASPRLAGYLTG
ADDVMRFELADRLAHLYDQYLTYRPNWLERWQSGETIEPGAATGWGETQRADEVWQSALW
RQVLAHLEIRERHPTLRAIDRIEALTPQTVPAGWPSRVSVFALSSMPPLSMALLKAMSRL
IEVHLYVLNPCESYWFDIVPPSRLSYLARRDGVAHREVGHPLLAEWGRQTQSHIDALYAD
LAPQAVEDRALFQANPAPTLLAALQNGILTLDDGRHGAPDGVSVDGSVQVHVCHSLARQI
EVLHDRLLACFDEIPDLRPDDVLVTVPDLGRAAPLIDAVFGTATPRIPYLVTGLPPTRTN
PVARAFAAILALAQQRVAVSSLVELARTEAIAQRYDLGGNGLDTVQNWLHAAGARRGWRG
DALLRLDAPQACALTGADVSPALERHTLGDAMMRLFLGYALPDDALPVDDWLPVGGIEGG
RAEWLGQLARLIDDLDATAVTLQTMRTGLAWRDQLLAMLEQFFSDEPRFADDVAEVRVAI
EQIGSAIADGAPEVRVPVDVVARVLANALDDPTRGGVPSGRVTFAAIPSLRLLPYRVVCM
IGMDDGVLPGRVRADEFDLMRALPQRGDRQRRDDERNLFLDLMLSAQDRFLMTYTGRSVR
DNAPLPPSTAVDELLDFAGQLLAPVSQGYSLDDQREARERLAVSHPLQPFSPAYFDGHDS
SLYSYDVANAEAAQQLADQLASPTPNARPAPFVREPLPAVVQTHLTLDDLLRFWRHPGRA
WARDRLGLSLGELLTEVDDEEPFVLDWAGRDALAARLLPRLMRHDARDEPAARAHADAIE
RIAKVSHELPGGATGAVWRRRALGGLRALASQVREAQAEGTRELQVTLPLTPALPPSWRE
STDAAWHGDATLRAACLLQGRLAPVSRYGLVMYRFGSQRPSDLLAAWLAHLALCAHLQQP
EHAGMDVAARTLWYGEDETFALRPVEDAATLLGQWVALYRLGQTRPLPFFTRSAWKLAST
GKPGEAQSAWLGSAFARGDADDPYTRLIWRGVEDPLAPPFDALANLLLGPLVQHLDAAEG
A
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgctccacctattcttttccaaccggttcaccaccctcgaagccgccctgttgcgcgat
ctcgcccaggcgcccggcagcacggggaaagccggtaatccgttcgagacggaaaccatc
gtcgtgccaagtgtggccgtgcggcgccggctcgaactggactatgccgatgtgttcggc
gtgtgtgccaacgttcgtctgacctatctcgcccagtggctgtgggacatggcggggcaa
ctggtcacggtgcccgagagttcgccgtttgcgccggaccggcttgtctggccgctgtat
cagtgcctcgcccagccgtggggggacgcctcgccgcgactggcgggctatctgacgggc
gcggacgatgtcatgcgcttcgaattggccgaccgactggcgcatctctacgaccaatat
ctgacctatcggccgaactggcttgagcggtggcaatccggagagacgatcgagccgggc
gccgccacgggctggggggagacgcagcgtgccgacgaagtgtggcagagcgccttgtgg
cggcaggtgttggcgcatctggagattcgcgagcgtcacccaacgttgcgggccatcgac
cggatcgaggcattgacgccgcagacggtgcctgccggatggccgtcacgggtgtcggtg
ttcgcactgtcgtcgatgccgccgctttcgatggcgctgctcaaggcgatgtctcgtctg
atcgaggtgcacctgtacgtgctgaatccgtgtgagagctattggtttgacatcgtgccg
ccgtcacgactgtcgtatctggcgcggcgcgatggggtggcgcatcgggaagtggggcat
ccgttgctcgccgaatgggggcgccagacgcaatcgcacatcgatgcgctgtatgccgac
ctcgcaccgcaggcggtggaggaccgggcgctgttccaggccaatcccgcaccgacgctg
ctcgccgccctgcaaaacggcattctcacgttggacgatggccgtcacggcgcgcccgat
ggcgtgagcgtcgacgggtcggtgcaggtgcatgtgtgccatagcctggcgcgtcagatc
gaagtgctgcatgaccggttgttggcgtgcttcgacgagattcccgatttgcgtcccgat
gatgtgctcgtcaccgtgccggatctggggcgcgcggccccgctgatcgacgccgtgttt
ggtaccgcgacacctcgcattccctatctggtgacggggttgccgccgacgcggaccaac
cccgtcgcgcgggcgttcgccgccatcctggccttggcgcagcagcgggtggcggtgtcg
agtctggtggaactggcacgcacggaggccatcgcacaacgctacgacctcggcggcaat
gggctcgacaccgttcaaaactggttgcatgccgccggtgcacgacgcggctggcgcggt
gatgccttgctgcggctcgacgcgccgcaggcgtgcgcgctgaccggggccgatgtctcg
ccggcgttggagcggcacaccctgggcgatgcgatgatgcggctgtttctcggctacgcc
ttacctgatgacgccttgccggtcgacgattggctacctgttgggggaatcgagggcggc
cgtgccgaatggctcgggcagttggcgcggctcatcgacgatcttgatgccaccgccgtc
acgctgcaaacgatgcgcacggggctcgcgtggcgcgatcagttgctggcgatgctggag
cagttcttttctgatgagccacgttttgccgacgatgttgccgaggtgcgcgtggccatc
gaacagatcggctcggccattgccgatggggcgcccgaagtgcgggtgccggttgacgtg
gtggcgcgcgtgttggccaatgcgctcgacgatccgacgcgcggcggcgtgccatcgggg
cgtgtgacgtttgcggcgatccccagcctgcgcctgctgccgtaccgggtggtgtgcatg
atcggcatggacgacggggtgctgccggggcgcgtgcgcgccgacgaattcgacctcatg
cgcgcgttgccgcaacgtggcgatcgccagcggcgcgacgacgaacgcaatcttttcctc
gatctgatgttgagtgcgcaggaccggttcctgatgacctacacgggccgaagcgtgcgc
gacaatgcgccgctgccgccatcgacggctgtggacgaattgctcgacttcgccgggcag
ttgctcgcaccagtgtcgcaggggtacagcctcgacgatcagcgcgaagcccgcgagcgg
cttgccgtgtcgcatccgcttcaaccgttttctcctgcctatttcgatggccacgactcg
tcgctctacagctacgacgtggcgaacgccgaggcggcgcagcaattggcggatcaactg
gcgtctcccacaccgaatgcccgccccgcgccattcgtgcgtgaaccgttgcccgctgtc
gtacaaacccatttgacgttggacgacctgctgcgtttctggcgtcatcccggcagagcg
tgggcgcgtgaccggctgggactctcgctcggcgaactgctcaccgaggtcgacgacgaa
gagccgttcgtgctcgactgggccggacgcgatgcgctggcggcacgcctgctgccgcgc
ctgatgcgccacgacgcacgcgatgagcccgccgcacgcgcgcatgccgacgccatcgag
cgtattgcgaaggtcagtcacgagttgccgggcggggcgaccggtgccgtctggcgccgc
agagcgttgggcggcctgcgcgcgctggcgtcgcaggtgcgagaggcgcaggcggaaggc
acgcgggagctgcaggtgacgctgcctttgacgccggcgctgccgccgtcatggcgcgaa
tcgacggacgctgcctggcatggcgacgccacgttgcgcgcagcatgtctgttgcaggga
cgcttggccccggtgtcgcgctatggactggtaatgtatcgattcggcagccagcgaccg
agcgatctgcttgccgcgtggctggcccatctggcgctttgtgcgcatctccagcagccc
gagcacgccggaatggacgtagccgccagaacgctctggtacggcgaagacgagacattc
gcgttgcggccggtggaagacgcggcgacgctgttggggcaatgggtggcgctgtaccgc
ctcggccagacgcggccgttgccattcttcacgcgaagcgcgtggaagttggcgagtacc
ggcaagccgggcgaggcgcaaagcgcgtggctcggttcggcattcgcacggggcgacgcg
gacgacccgtacacgcgactgatctggcgcggcgtggaggatccgctggcgccgccgttc
gatgcgctcgccaatctcctgctcggccctctggtgcaacaccttgacgcggcggagggc
gcatga
DBGET
integrated database retrieval system
