Pandoraea sp. XY-2: DRB87_18080
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Entry
DRB87_18080 CDS
T06086
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pand
Pandoraea sp. XY-2
Pathway
pand02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DRB87_18080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pand02000
]
DRB87_18080
Transporters [BR:
pand02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DRB87_18080
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Paralog
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GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
OB_MalK
SMC_N
CysA_C_terminal
Rad17
AAA_22
AAA
AAA_28
AAA_25
DUF192
ORC-CDC6-like
Mg_chelatase
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QBC32865
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Position
4000630..4001682
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AA seq
350 aa
AA seq
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MANVSLRSLRKQYGNAAAVADFSLEIADGELVAFLGPSGCGKTTTLRMVAGFVEPTAGEI
WIGGKEVSRLPAHRRNTGMVFQRYALFPHMTVAENVAFGLEMRHVSSAERVTRIREALDM
VRLTSLADRYPRQLSGGQQQRVAIARALAIRPDVFLLDEPLSNLDAKLRTEVREEIRALQ
RRLGLTTIFVTHDQEEALAIADRLAVMHDGCVQQIGTADALYERPANPFVANFLGKMNFL
AGRMTDGHFVTAKGERLALPSAAPDATTLGIRPERLRLSDTPVHNETAMPVTVDQTIYLG
STLELRLKSPQGEMLVAHVQNTARDDVGRYAPGRALNACFASTDCLFFNA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgtctcgttgcgcagcctgcgcaagcaatacggcaacgccgccgccgtggcg
gacttctcgctggaaattgccgacggcgaactcgtcgccttccttggcccgagcggctgc
ggcaagaccacaacgctgcgcatggtcgcgggcttcgtcgagccgacggccggcgaaatc
tggatcggcggcaaggaggtctcgcgcctgcccgcacatcgacgcaacaccggcatggtg
ttccagcgttacgcgctctttccgcacatgaccgtggcagagaacgtggcgttcggcctc
gagatgcggcacgtgtcgagtgccgagcgcgttacgcggattcgcgaagcgctcgatatg
gtgcgtctcacgtcgctcgcggatcgctatccgcgccagctctccggcggtcaacagcag
cgtgtggcgattgcccgcgcactggcgattcgtcccgacgtgtttctgctcgacgaaccg
ctgtccaacctcgacgccaagctgcgcaccgaagtgcgcgaagagatccgcgccttgcag
cgacggctcggcctgacgacgatcttcgtcactcacgatcaggaagaagcgctggcgatt
gccgaccgcctggccgtgatgcacgacggctgcgtgcagcagatcggcaccgccgatgcg
ctctacgagcgcccggccaatccattcgtcgcgaactttctcggcaagatgaatttcctc
gccgggcggatgaccgacggccatttcgtgaccgccaaaggcgagcgcctggcgttgccg
agcgccgcccccgacgccacgacgctcggcattcgccccgagcgcctgcgcctgagcgac
acgcctgtgcacaacgaaacggccatgccggtcacggtcgatcagacgatctatctcggt
tccacgctcgaactccgtctgaagagtccgcagggcgagatgctcgtcgcgcacgtgcag
aacaccgcacgcgacgacgtcggccgctatgccccgggccgcgccctcaacgcatgcttt
gccagcaccgattgcctgtttttcaacgcctga
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