Pandoraea sp. XY-2: DRB87_18125
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Entry
DRB87_18125 CDS
T06086
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DRB87_18125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pand03019
]
DRB87_18125
Enzymes [BR:
pand01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DRB87_18125
Messenger RNA biogenesis [BR:
pand03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DRB87_18125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QBC32870
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All DBs
Position
4010090..4011640
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AA seq
516 aa
AA seq
DB search
MIRKLIKKLLGKDSQANLPPTGKPVVIPASVHGIDPSLLSKNAVRVTDTLQQAGFKAFIV
GGAVRDLLLGIAPKDFDVATSATPEQVQRLFRRARIIGRRFQIVHVQFGQEIIETSTFRA
LVDAVDSEQIGARRPKKGELDRKTHVTDESGRVLRDNVWGEQEEDAARRDFTVNAMYYDP
AAQTVHDYHHGWEDIQKRVLRMIGDPATRYREDPVRMLRVVRFAAKLGFKIDDATAEPIT
QLAPLIDNVPAARLFDEMLKLLLSGHAWACVQQLREQGLHHGLLPLLDVVLEQPLGEKFV
MLALANTDARIRAGKPVSPGFLFAALLWHLVLEKWQAYQSAGEYPIPALHLAMDDVLDAQ
TGKLAIQRRFVADMKDIWGLQVRLDKRVGRTPLRMLEHPRLRAGYDFLLLRCESGEVPAE
AGQWWTDFLEGDAATRDTLLSQGSGPGSTPAAKRRRRRRKPTGGSSGESAGGERGDGAAA
TRARPARIRASGYHRDSMVPKVPHDCCLHRARRESR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcaaactcatcaagaaactgcttggcaaagacagccaggccaacctgcccccg
accggcaaaccggtcgtcatccccgcctcggtccacggcatcgatccgagcctgctctcg
aagaacgccgtgcgcgtgaccgacacgctgcagcaagccgggttcaaggccttcatcgtc
ggcggcgccgtgcgcgatctgctgctgggcattgcgccgaaagacttcgacgtcgccacc
agcgccacgcccgagcaggtccagcgcctgttccgccgcgcgcgcatcatcggtcgccgc
ttccagatcgtgcacgtgcagttcgggcaggagatcatcgagacctccacgttccgggcg
ctggtcgatgccgtcgacagcgagcagatcggcgcacgtcgtccgaaaaaaggcgaactc
gaccgcaagacgcacgtcaccgacgaatcgggccgcgtactgcgcgacaacgtctggggc
gagcaggaggaagacgccgcccggcgcgacttcaccgtcaacgccatgtattacgatccg
gcggcccagacggtgcacgactatcaccacggctgggaagacattcagaagcgcgtgctg
cgcatgatcggcgacccggccacgcgctaccgcgaagaccccgtgcgcatgctgcgcgtg
gtgcgtttcgcggccaagctcggcttcaagatcgacgacgcgacggccgagccgattaca
cagctcgcgccactcatcgacaacgtgccggcggcgcgtctgttcgacgagatgctcaag
ctgctgctctcgggtcacgcgtgggcgtgtgtgcagcaactgcgtgagcagggcctgcat
cacggcctgctgccgttgctcgacgtggtactggagcagccgttgggcgagaaattcgtc
atgctggcgctcgccaacaccgatgcacgcatccgcgcgggcaagccggtctcgccgggc
ttcctgttcgccgcgctgctctggcatctcgtgctcgaaaagtggcaggcctatcaaagt
gcgggcgaatatccgattccggcgctgcatctcgcgatggacgacgtgctcgacgcgcaa
accggcaagctggcgatccagcgccgtttcgtcgccgacatgaaggatatctggggcttg
caggtgcgcctggacaaacgcgttggccgcacgccgctgcgcatgctcgagcatccgcgc
ctgcgcgcgggttacgatttcctgctgctgcgttgcgaatcgggtgaagtcccggccgaa
gccggccaatggtggaccgacttcctcgaaggcgacgccgcgacacgcgacacactgctt
tcccaaggcagcggaccgggctccacgccggccgccaagcgtcgccgccgacgtcgcaaa
ccgacgggcggaagcagtggcgaaagcgcgggcggcgaacgtggcgacggggcggcggca
acgagagcgcgaccagcgagaatcagggcaagcgggtatcatcgcgacagcatggttccg
aaggtgcctcatgactgttgcctacatcgggctcggcgcgaatctcggtga
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