Pandoraea sp. XY-2: DRB87_19980
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Entry
DRB87_19980 CDS
T06086
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DRB87_19980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pand03019
]
DRB87_19980
Messenger RNA biogenesis [BR:
pand03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DRB87_19980
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Ortholog
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QBC33151
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Position
4409042..4409692
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AA seq
216 aa
AA seq
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MLDREGFRPNVGIILLNARNEVFWGKRLGEHSWQFPQGGIKYGETPEQAMFRELHEETGL
KPEHVKIIGRTRDWLRYEVPDKFIKREVRGHYRGQKQIWFLLRMVGRDCDICLRATEHPE
FDAWRWNEYWVPLDAVIEFKREVYQLALNELSRYLRRSAARAQQDRRRFPRAGARVGELP
PGASIADDDTCDGGSCVDEAGEMAGAASVGTPPREH
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccgtgaaggctttcgcccgaacgtcggcatcatcctcttaaacgcacgcaat
gaagtgttctggggcaagcggctgggcgagcactcctggcagttcccgcaaggcggcatc
aagtacggcgaaacgcccgaacaagccatgttccgagaattgcacgaagaaaccgggcta
aagccagaacacgtcaaaatcatcggtcgcacgcgcgactggctgcgttatgaggtgccg
gacaaattcatcaagcgcgaagtgcgcggacattaccggggccagaagcaaatctggttc
ctgctgcgcatggtcggtcgcgactgcgatatctgcctgcgcgcgaccgagcatccggag
ttcgatgcctggcgctggaacgaatattgggtgccgctcgacgccgtgatcgagttcaag
cgcgaggtctaccaactcgcgctgaacgaactctcgcgctatctgcgacgctcggcggcg
cgcgcgcagcaggatcggcgacgctttccgcgcgccggggcccgggtcggcgaattgccg
ccgggcgcgagcattgcggatgacgacacctgcgacggcggcagttgtgtcgacgaggcc
ggcgaaatggcaggtgccgccagtgtcggcacaccgcctcgggagcactga
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