Pandoraea sp. XY-2: DRB87_20025
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Entry
DRB87_20025 CDS
T06086
Name
(GenBank) type II/IV secretion system protein
KO
K02652
type IV pilus assembly protein PilB
Organism
pand
Pandoraea sp. XY-2
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pand02044
]
DRB87_20025
02035 Bacterial motility proteins [BR:
pand02035
]
DRB87_20025
Secretion system [BR:
pand02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
DRB87_20025
Bacterial motility proteins [BR:
pand02035
]
Pilus system
Pilus assembly proteins
DRB87_20025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_16
AAA_22
AAA_7
AAA_30
nSTAND3
AAA_19
AAA_14
ResIII
AAA_29
AAA_11
cobW
DEAD
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
QBC33158
LinkDB
All DBs
Position
4416667..4417863
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AA seq
398 aa
AA seq
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MSFHSSEVSATATTTEPLASTSRASLDATTPLQFLEQMLGEAVRAGASDVHFEPMAQRFR
IRLRIDGHLYEHCDVPLPWRDMLVSRLKVLANLDIAQKRLPQDGRMVWREAGEPVECRVS
ALPTLHGEKLVVRLLDGAKVPLSLEGLGYTPKQYLALTRAIARPHGMILLTGPTGSGKTV
SLYSCLKRLNDTSRNIVTIEDPVEIRLPGVTQVNLNERAGLDFATALRAFLRQDPDVLVV
GEIRDTQTAEIAVQAAQTGHLVFATVHANDATSTLARLFDLGVAPFNLSSTLLLISAQRL
LRRRCPAGCEPGRAPEDIVRAGPPCMRCHGTGFAGRIGAFQVMPISAVQATNIAQARSPH
ALAAQAQREGVMTLREAGLWHCATGTVSEEDVDATTPA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcattcctctgaagtctccgccacggcgacaaccaccgagccgctcgcgtca
acgtcgcgcgcatcgctcgacgccaccacccccttgcagtttctcgaacagatgctgggc
gaggcggttcgggctggcgcgtccgatgtgcacttcgaaccgatggcacaacgctttcgc
attcgactgcggatcgacggccatctttacgagcactgcgatgtgccgctgccgtggcgc
gacatgctcgtctcacgcctgaaggtgctcgccaatctggatatcgcccagaagcgtctg
ccgcaggacgggcgcatggtgtggcgcgaagcgggcgaacccgtggagtgccgcgtcagc
gcattgcccacgctgcacggcgagaagcttgtcgtgcgtctgctcgatggcgcgaaggtt
ccgctctcgctggaaggactcggctacacgccaaagcagtacctcgcgctcacgcgcgcc
attgctcggccacacggcatgattctgctgaccggcccaaccggcagcggcaagaccgtc
tcactttacagttgcctcaagcggctcaacgacacctcgcgcaatatcgtcaccatcgaa
gacccggtcgaaatccgcttgccaggggtcacgcaggtcaatctcaacgagcgcgccggg
ctcgacttcgcgaccgccttgcgcgcgtttcttcgacaggatccggacgtgctcgtcgtc
ggcgagattcgcgatacccaaaccgccgagatcgccgtgcaggcggcgcagaccggacac
ctcgtattcgcaaccgtccatgcgaacgacgcgacgagcacactcgcccgactgttcgat
ctcggggtcgcaccgttcaatctgtcgtcgacgctgctgctcatcagcgcacagcgcttg
ctcaggcgtcggtgtccggcgggttgcgaacccggtcgtgcgccagaggacatcgtccgg
gccggcccgccctgcatgcgctgtcacggcacgggcttcgccgggcgcatcggtgcgttc
caggtcatgccgatcagcgcggtgcaagcgaccaacattgcacaggcccgaagccctcac
gcactcgcggcgcaagcgcagcgcgaaggtgtgatgaccctgcgcgaagccggtctctgg
cattgcgcaacaggcaccgtaagcgaggaggatgtcgatgcgaccacgcccgcctga
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