KEGG   Pandoraea sp. XY-2: DRB87_21225
Entry
DRB87_21225       CDS       T06086                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pand  Pandoraea sp. XY-2
Pathway
pand00300  Lysine biosynthesis
pand00470  D-Amino acid metabolism
pand01100  Metabolic pathways
pand01110  Biosynthesis of secondary metabolites
pand01120  Microbial metabolism in diverse environments
pand01230  Biosynthesis of amino acids
Module
pand_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pand00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    DRB87_21225 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    DRB87_21225 (lysA)
Enzymes [BR:pand01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     DRB87_21225 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QBC33343
LinkDB
Position
4664504..4665772
AA seq 422 aa
MSDAIFSYRNDVLHAEGVALPALAERFGTPLYVYSKAALTSAYQAYAKACEGRNAAVHYA
AKANSNLAVLGVFAKLGAGFDIVSAGELARVIAAGGDPKRAVFSGVGKHADEMRYALEKN
VFCFNVESRPELDRLNEVAGQAGKRARVSLRVNPNVDAKTHPYISTGLRGNKFGVAYEEA
FDAYRAAAAMPNLEVVGIDCHIGSQITEISPYLDATDKVLDLVEKLEAAGISLHHIDVGG
GLGITYTDETPPDITAFATTLLDHIAKRGHGHRQVLFEPGRSLVGNAGVLLTRVEFLKHG
ETKNFAIVDAAMNDLARPAMYEAYHGIDPVERRAGDGVIYDVVGPVCESGDWLGRDRALA
IAPGDLLAIRSAGAYGFTMSSNYNTRPRAAEVMVDGNEAYLVRERETVESLFAGERLLPD
HA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtccgacgccatcttttcctaccgcaacgacgtactccatgccgagggcgttgcactg
ccggccctcgccgagcgtttcggcacgccgctgtacgtctattcgaaagcggctctgaca
agcgcctatcaggcgtatgccaaggcctgcgaaggccgcaacgccgccgtgcactacgcg
gccaaggcgaactcgaacctcgccgtgctaggcgtgttcgccaagctcggtgcgggtttc
gacatcgtgtccgccggtgaactcgctcgcgtgatcgcggcgggcggcgatccgaagcgc
gccgtgttctcgggtgtcggcaagcacgccgacgaaatgcgctacgcgttggaaaagaac
gttttctgcttcaacgtcgaatcgcgtccggaactggaccgactcaatgaagtggccggg
caagcgggcaagcgcgctcgcgtttcgctgcgcgtgaacccgaacgtcgacgccaagacg
catccgtacatttccaccggcctgcgcggcaacaagttcggtgtggcctacgaagaagcc
ttcgacgcctatcgcgccgccgccgccatgccgaacctcgaagtcgtcggcatcgactgc
catatcggctcgcagatcacggaaatttcgccgtatctcgacgccaccgacaaggtgctc
gatctggtcgaaaagctcgaagcggcgggcatctcgctacatcacatcgacgtgggcggc
ggcctgggcatcacttatacggacgaaacgccacccgacatcaccgcgttcgccaccacg
ctgctcgatcacatcgccaagcgcggccacgggcaccgtcaagtgctgttcgagccgggc
cgctcgctcgtcggcaacgccggtgtcctgcttactcgcgtggagttcctcaagcacggt
gagacgaagaactttgccatcgtcgatgcggcgatgaacgatctggcgcgtcctgcgatg
tatgaggcctatcacggcatcgatccggtcgagcgacgtgccggcgacggcgtgatttac
gacgtcgtgggtcccgtgtgcgaaagcggcgactggctggggcgcgaccgcgccttggcg
attgcacccggcgatctactcgccattcgctcggcaggtgcctacggcttcacgatgagt
tccaactacaatacgcgtccgcgcgccgccgaagtcatggtcgacggcaacgaagcctac
ctcgttcgcgaacgtgagacggtcgaatcgctcttcgcgggcgaacgactgctgcccgac
cacgcctga

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