Pandoraea sp. XY-2: DRB87_21930
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Entry
DRB87_21930 CDS
T06086
Name
(GenBank) polysaccharide biosynthesis protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00541
Biosynthesis of various nucleotide sugars
pand00552
Teichoic acid biosynthesis
pand01100
Metabolic pathways
pand01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DRB87_21930
00552 Teichoic acid biosynthesis
DRB87_21930
Enzymes [BR:
pand01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
DRB87_21930
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_10
KR
adh_short
PglD_N
ApbA
Motif
Other DBs
NCBI-ProteinID:
QBC33458
LinkDB
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Position
complement(4806496..4808427)
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AA seq
643 aa
AA seq
DB search
MLRKFQRVTSLPRTAKRGLMLLADTILLPLSLWTAIGLRLDDWRFPQLHAWWVYLLTAVV
AIPIFIRLGLYHAVVRFIETRALIMIGVAVTISVWLFAGLLALLSLPSVPRGALLIYWMI
AVLYIGSSRFLARFALRGLFTAGPRDRRAVIIYGAGSAGCQLATALRANPEYQPVLFVDD
SKALQNLEVMGLRVCSPEDFPSLIPRYRVGVVLLAMPSLARSRRIEIIDTLESLRVEVRS
VPGMSDLVDGTVQASDIRDIEIDELLGRESIPPNKALLAANIEHRCVMVTGAGGSIGSEL
CRQIVQQAPRTLILYELSEFALYTVESELRQLMQRTRHEIELVSILGSVQNMARMHKVMS
HYRVQTVYHAAAYKHVPIVEFNMIEGVLNNTFGTRAAAQAAIAAGVEAFVLISTDKAVRP
TNVMGASKRFAELVLQAYASDSAIKTRFCMVRFGNVLGSSGSVVPLFRRQIESGGPVTVT
HPDITRYFMTIPEAAQLVIQAGAMGGSGEVFVLDMGEPVRIVDLARRMIHLSGYSVRDEQ
NPEGDVEIRFSGLRPGEKLYEELLIGDDVTGTQHPRIMMANEQYLDRAGVDVLLSRMETA
CENGDHERVIATLRACVSGFRPESEIRDHLYGSMQEASRYPIQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaaaattccaacgcgtcacctcgctaccgcgcaccgccaagcgcgggttgatg
ctgcttgcggacaccatattgctcccgctgtcgctgtggacggcgatcggcctgcgtctg
gacgactggcgctttccgcaacttcatgcgtggtgggtgtatctgcttacggcggtcgtg
gccattccgatcttcatacggttgggactgtaccatgcggtggtgcgcttcatcgaaacg
cgcgcgctcatcatgattggtgtcgccgttacgatttccgtctggctgtttgccggattg
ttggcgttgctctccctgccgtcggtgcctcgcggggccttgctcatctactggatgatc
gcggtactgtacatcgggtcgagccgctttctggcccgcttcgccttgcgtggactgttc
acggcagggccgcgcgatcgccgcgccgtcattatttacggcgctggtagtgcaggctgt
cagctcgcgacggcattgcgcgccaatccggaatatcaaccggtgctgttcgtggacgac
agcaaagcgttgcagaacctggaagtgatggggcttcgcgtttgctcgccggaagatttt
ccgtcgctcataccccgatatcgggtgggtgtcgtgctgctggcgatgccgtcgctggcg
cgctcgcgccgcatcgagattatcgacacgctcgaatcgctgcgtgtcgaggtgagatcc
gtgccggggatgtccgatctggtggacggaacggtgcaggcaagcgacattcgcgacatc
gaaatcgacgaattgctggggcgcgaatccataccgccgaacaaggcgcttctggcggct
aacatcgaacatcgctgtgtcatggtcacaggcgcgggcggatcgatcggctcggagcta
tgccgccagatcgtgcagcaggcgccacggacgctgatcctttatgagctctcggagttt
gcgttgtacaccgtcgagagcgaactgcgtcagttgatgcagcgtacccgccacgagatc
gaactggtgtcgattctcggctccgtgcaaaacatggcacgcatgcataaggtgatgtcg
cattatcgcgtgcagaccgtctatcacgccgccgcatataagcacgtgccgatcgtggaa
ttcaacatgatcgaaggcgtgctcaacaacacgttcggcacgcgcgctgccgcgcaggcg
gcgattgccgctggcgtcgaagctttcgtgctcatctcgacagacaaggccgtgcgtccg
accaacgtcatgggggcgagcaagcgcttcgccgaactggtgttgcaggcgtatgcgagc
gactctgcgatcaagactcgtttctgcatggtgcggttcggtaacgtgctgggctcgtcg
ggatctgtcgtaccgctgtttcgccgacagatcgagagcggtggcccggtgacggtgacg
catccggacatcacgcgttacttcatgacgattcccgaagccgctcagcttgtgatccag
gcgggggcgatggggggcagcggggaagtgttcgtgctcgacatgggggagccggtccgt
atcgtggatcttgcgcgccgcatgattcacctgagtggctattccgtgcgcgacgagcag
aatcccgaaggtgacgtcgagattcggttctcggggctgcgtccgggggagaaactatac
gaagaactgctcattggcgacgatgtcactggcacccagcacccgcggatcatgatggcg
aacgagcagtatctcgatcgcgcaggcgttgacgtgctgctctcccggatggagaccgct
tgtgagaacggcgaccacgaacgtgtgattgcgacactgcgcgcgtgcgtctcggggttt
cggccggagtcggagattcgcgatcatctttacggatcgatgcaagaggcgtcgcgctat
ccgatccagtga
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