Pantoea sp. X85: P6287_00675
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Entry
P6287_00675 CDS
T10770
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pane Pantoea sp. X85
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
P6287_00675 (hmsP)
Enzymes [BR:
pane01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
P6287_00675 (hmsP)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
WFL69330
LinkDB
All DBs
Position
149002..151014
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AA seq
670 aa
AA seq
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MRVSRSLTIKQMATVSAVAMVTICIFIVIQLFHFVQQRRIDYAQQMENVAHTVRQPLSEA
VLKADIPQAERILNTLKPAGILSRADVVLPNAFQALHADFAPEKPVPRWVARLFELPVQI
TLPLYSVERSGLPKPIAYLVLQADSSRVYQFLLSTLSTMITTYLLLALILSIAISWCINR
LIVHPLRDISRDLQELPPQAILTHKMKLPNNHRDDEIGMLIRSYNRNQQVLESIHDEMSR
MTTHFAVTDLPNRALFLALLEQHISHRHNRQAWGLMVIRIETLQEANGVLSDEQRDTLML
TLVEKIRSTVDDHSLLAQTGPSDFALLMKRAHNPFRAMRLARNLMIRINQPVNLQQLQLR
PNASIGLALHEESSISASEQLDRATSAMMSARHQGKNQILFFDPALTERAQKRLTQEHDI
LQGLQDEQFALYLQPQINMETGELAGAEALLRMRMPDGSYGLSEEFIASAEEIGVISAIG
RWVFEEACRILAGWQKQGINIPLSVNISAVQLRDASMVSHLQGLLERHRIAPGNFVLEIT
ETAQIGDAEQAIALLRLLQQTGVAVALDDFGMGYSNLNYLHQFKALPVNKLKMDRSFVAA
LPDDDTMVRIVAAIADIIHLDVIAEGVETAEQRDWLLARGITIGQGYLYAEALPLHVFNQ
RWLNSSQLPE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagtcgttctctaacgataaagcagatggcgacggtttccgccgtggcgatg
gtgaccatctgcatctttattgtcatccagctctttcactttgtgcagcagcgcaggatt
gactacgcccagcaaatggaaaatgtggcgcacaccgtgcgtcagccactctccgaagcg
gtgctcaaagccgatattccgcaagccgaacgcatccttaataccctgaaaccggccggt
attttatcgcgcgccgatgtggtgttgccaaatgccttccaggcgctgcacgccgatttt
gcgccggaaaaaccggtgccgcgctgggtcgcacgcctgtttgagctgccggtacaaatc
acgctgccgctctattctgtggagcgttccggtttgccgaagccgattgcctatctggtg
ctacaggctgattcctcccgcgtctatcagttcctgctcagcacgttatccaccatgatc
accacctatctgctgctggcgctgattctctcgatcgccattagctggtgtatcaaccgc
ttgattgtgcatccgctgcgcgatatttcgcgtgatttacaggagctgccgccgcaggcg
attctgacccacaaaatgaagctgccgaataatcatcgcgatgatgaaatcggcatgctg
atccgcagctacaaccgcaaccagcaggtgctggagtcgattcacgacgaaatgagccgc
atgaccacgcattttgccgttacggatctgcccaatcgcgcgctgttccttgcgctgctc
gaacagcacatcagtcatcgccacaatcgtcaggcgtggggcttgatggtgattcgcatt
gaaacgttgcaggaagccaacggcgtgctgagcgatgagcagcgcgatacgctgatgctg
acgctggtggagaagattcgcagcaccgttgacgatcactcactgctggcgcaaaccggg
cccagcgacttcgccttgctgatgaagcgcgcgcacaatccgttccgcgccatgcgtctg
gcgcgcaacctgatgattcgcattaatcagccggtgaacctgcaacagctgcagctgcgt
ccgaacgccagcattggcctggcgctgcacgaagagagcagcatctcggccagcgaacag
ctcgatcgcgccacctcggcgatgatgtcggcgcggcatcagggcaaaaaccagattctg
ttcttcgatccggcgctcaccgagcgggcgcaaaagcgtttaacgcaggaacacgacatc
ttgcaaggtctgcaggacgagcagtttgctctttatctccagccgcaaatcaatatggaa
accggcgagctggccggtgccgaagcgctgctgcgcatgcgcatgccggatggcagctac
ggattatcggaagagtttattgccagcgccgaagagattggcgtgatctcggccattggc
cgctgggtgtttgaagaagcctgccgcattctggccggctggcagaagcagggcattaac
atcccgctcagcgtcaatatctcggcggtgcagctgcgtgatgccagcatggtcagccat
ttgcagggcttgctggagcgccatcgcatcgcgccgggcaacttcgtattggaaatcacc
gaaaccgcgcagattggcgatgccgaacaggcgattgcgctgctgcgcttgctgcagcaa
accggcgtggcggtagcgctcgatgatttcgggatgggctactccaacctcaactatctt
catcagttcaaagcgctgccggtaaataagctgaaaatggatcgcagcttcgtcgccgcg
ctgccggatgacgacaccatggtgcgcatcgtggcggcgattgccgacatcattcacctc
gacgtcatcgccgaaggtgtggaaaccgccgagcagcgcgactggctgctggcgcgcgga
attactatagggcaaggctacttatacgctgaagcgctgccgctccacgtctttaaccaa
cgctggctcaatagctcgcaactcccagaataa
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