Pantoea sp. X85: P6287_01040
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Entry
P6287_01040 CDS
T10770
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pane Pantoea sp. X85
Pathway
pane00071
Fatty acid degradation
pane00280
Valine, leucine and isoleucine degradation
pane00310
Lysine degradation
pane00362
Benzoate degradation
pane00380
Tryptophan metabolism
pane00410
beta-Alanine metabolism
pane00640
Propanoate metabolism
pane00650
Butanoate metabolism
pane00907
Pinene, camphor and geraniol degradation
pane00930
Caprolactam degradation
pane01100
Metabolic pathways
pane01110
Biosynthesis of secondary metabolites
pane01120
Microbial metabolism in diverse environments
pane01200
Carbon metabolism
pane01212
Fatty acid metabolism
Module
pane_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
P6287_01040 (fadB)
00650 Butanoate metabolism
P6287_01040 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
P6287_01040 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
P6287_01040 (fadB)
00310 Lysine degradation
P6287_01040 (fadB)
00380 Tryptophan metabolism
P6287_01040 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
P6287_01040 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
P6287_01040 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
P6287_01040 (fadB)
00930 Caprolactam degradation
P6287_01040 (fadB)
Enzymes [BR:
pane01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
P6287_01040 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
P6287_01040 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
P6287_01040 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
P6287_01040 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WFL67719
LinkDB
All DBs
Position
complement(227178..229361)
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQGDTLSVHWLDDGIAELVFDAPGSVNKLDTKTVASLGEALSVLEQQPALRGLLLSSA
KPAFIVGADITEFLSLFDAPEEKLSQWLAFANSIFNRLEDLPVPTVAAIDGYALGGGCEC
ILATDFRIATPTARIGLPETKLGIMPGFGGSVRLPRLLGADSAMEIIAAGKDVDGSSALK
LGLVDAVVSSDKLRAAALTVLQDAIVQGNWQTRRAPKLAPLKLSPIEAAMSFTIAKSMVL
QTAGKHYPAPITAVKTIEAAASLGRDDALKLETAAFVPLAQSDVARALVGIFLNDQYVKG
LAKKHSSAAGAPQQAAVLGAGIMGGGIAYQSAWKGVPVMMKDINPQALTLGMTEASKLLN
KQLERGKIDGAKLASVLTTIQPTLDYAGFERTDVVVEAVVENPQIKAKVLAETEQHLRED
AILASNTSTIPISLLAQALKRPENFCGMHFFNPVPRMPLVEVIRGEKTSEATLSKVVAWA
SKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRQIDKVMEKQFGWPMGPAWLL
DVVGIDTAHHAQQVMAQGFPSRMQKDYRDAIDVLFDAKRYGQKNGQGFYRWEQDKKGKAQ
KRADAAVDALLEPICQPTRVFSDDEIANRMMLPMLNEVVRCLEEKIIASPAEADMALVYG
LGFPPFRGGAFRYMDTLGNSNVVDQAKRYTALGPLYALPELLLQKAHQHQSWYPAVQPID
EAALQSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgataccctttcagttcactggcttgacgacggcatcgccgagctg
gttttcgatgcgcccggttcggtgaacaaactcgataccaaaaccgttgcctcgttgggc
gaggcattaagcgtattggaacagcaacccgcgctgcgcggcctgttgctctcgtcggcc
aaaccggcatttatcgttggtgccgacatcacagaattcctgtcgctgtttgatgcgcca
gaagagaagctgagccagtggctggcgtttgccaacagcatcttcaatcgtttagaggat
ttgccggtgcccaccgtggctgccatcgacggctatgcgctgggcggcggctgtgaatgc
atactggcgaccgacttccgcattgccacgccgaccgcacgcattggcctgccggaaacc
aaactgggcattatgccaggctttggcggcagcgtgcgcttgccgcgcctgcttggcgcc
gatagcgcgatggagattatcgccgccggtaaagatgttgatggcagcagcgccctgaaa
ctcggtttggtggatgcggtagtcagcagcgacaaactacgtgccgctgcgctgaccgta
ttgcaggacgccatcgtgcagggcaactggcagacacgccgcgcgccgaagctggcaccg
ctgaaactcagcccgattgaagccgccatgagcttcaccatcgccaaaagcatggtgctg
caaaccgcgggcaaacactatccggcaccgatcaccgccgtgaaaaccattgaagctgcc
gccagcctcggacgtgatgatgcgctgaagctggaaaccgccgcgtttgtgccgctggcg
cagagcgatgtggcacgcgcgctggtcggtatcttcctgaacgatcagtacgtcaaaggc
ctggcgaaaaagcacagcagtgcggccggtgcgccgcagcaagcagcagtattaggcgca
ggcattatgggcggcggcattgcttatcaatcggcatggaaaggcgtgccggtgatgatg
aaagatatcaatccgcaggcgttaacgctgggcatgaccgaagccagcaagctgctgaac
aaacagctggagcgcggcaaaattgatggcgcgaaacttgcgagcgtactcaccaccatt
cagcccacgctggattacgccggattcgaacgcaccgacgtggtggtagaagcggtagta
gagaatccgcagatcaaagccaaagtgctggcagagaccgaacagcatctgcgcgaggac
gccattctcgcctccaacacctcaaccattccgatcagcctgctggcgcaagccctgaaa
cgtccggaaaacttctgcggcatgcacttcttcaatccggtaccgcgtatgccgctggtt
gaagtgattcgcggtgagaaaacctcagaagcgaccctcagtaaagtggtggcctgggcg
agcaaaatgggcaagacgccgattgtggtgaatgactgtcccggcttctttgtgaatcgc
gtgctgttcccctacttcgccgccttcagcctgctgctgcgcgacggcgcggatttccgt
cagatcgataaagtgatggaaaaacagttcggctggccgatgggccccgcgtggctgctg
gatgtggtcggcattgataccgcgcatcacgctcagcaggtgatggcgcaaggtttcccg
tctcgcatgcagaaagattatcgcgacgcgatcgacgtgctgtttgacgccaaacgttac
ggccagaaaaacggtcagggcttttaccgctgggagcaggataaaaaaggcaaagcgcag
aagagagccgatgcggctgtcgatgcgctgctggaaccgatttgccagccgacgcgcgtg
ttcagcgatgacgagatcgccaaccgcatgatgctgccgatgctcaacgaagtggtgcgc
tgcctcgaagagaagatcatcgcttcaccggccgaagctgatatggcgctggtgtacggt
ttaggcttcccgccgttccgtggcggcgcgttccgctacatggatacgctgggcaacagc
aacgtggtcgatcaggccaaacgttataccgcgctcggcccgctgtatgcgctgccggag
ctgctgttgcaaaaagcccatcagcatcagagctggtatcccgcggtgcaaccgattgac
gaagcggcgctgcaaagtgcctga
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