Pantoea sp. X85: P6287_01985
Help
Entry
P6287_01985 CDS
T10770
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pane Pantoea sp. X85
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pane03000
]
P6287_01985
Transcription factors [BR:
pane03000
]
Prokaryotic type
Helix-turn-helix
Other families
P6287_01985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
GAF
HTH_50
Mg_chelatase
MCM
PAS_8
AAA_16
AAA
PAS
AAA_3
AAA_2
HTH_30
Phage_CP76
DUF1492
ATPase
HTH_23
DAP3
nSTAND3
AAA_7
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
WFL67890
LinkDB
All DBs
Position
complement(449261..451216)
Genome browser
AA seq
651 aa
AA seq
DB search
MRASERLPFKDESDPIFSLPDSAEVGEWDTLLWQGWHSFERGEQPGWMRHSILQSWRRSQ
QRAIDPATFAYVSPPAAELAAILEHNAELILAARSIMENLLAYNPDGHINLTDAQGVTLH
FCGADLTPVGSILREEVLGTNCTARCLIEQRLVYVLSGENWKLDLRKRHRQCAAAPVRDA
SGQLLGVLTLTATPDNFNAHTLGTVQAAAEAVGQQLMLRRLLAEQQSILETLNEGVIVCD
RHGRIKTLNRYARQIFSSLDPSAGPIDVLLQPQGGSLLTMPFCNDRELQFMPDGVHPLSC
LISLMPAPDGGRVLSLRENQRIRAITRRVMGVGASYTFEMIRGHAPRVLQAIQKARASSR
SDSTVLLTGESGTGKELFAQAIHNASPRQQEAFIALNCGALPRDLVQSELFGYVDGAFTG
SRRGGSAGKFELADGGTLFLDEIGEMPLEAQTSLLRVLQEGEVVRIGAAHPIKVNVRIIA
ATHCNLLDAVEKGAFRRDLYYRLNVISLEIPPLRERQEDIPGLVNTFIQALCTRLKRIAP
QLSAEAMRCLQAWHWPGNVRELENLVERMVNLCEGLEIERHDLPEEMVQRNTPVASELSS
LQENERQHVMQVVREHKGNLRQSAQRLGISRTALYNKLHQWQVDVAELRRG
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccagtgagcgtttgccgtttaaagatgaaagcgatccgatcttcagcttgccg
gacagcgcggaggtgggcgaatgggatacgttgttgtggcagggctggcacagcttcgaa
cgcggtgaacagcccggctggatgcggcacagcattttgcagtcgtggcggcgatcgcag
cagcgcgcgatcgatcccgccacctttgcctatgtctcgccacccgctgcggaactggcg
gcgatccttgagcacaatgccgagttgatcctcgcggcgcgcagcatcatggaaaacctg
ctggcgtataacccggatggccacatcaatctgaccgatgcgcaaggcgtgacgctgcac
ttctgcggcgcggatctgacgccggtcggcagcatcctgcgcgaagaggtgctcggcacc
aactgcaccgcgcgctgcctgattgagcagcggctggtgtacgtgttgagtggcgaaaac
tggaagctggatctgcgcaaacgccatcgccaatgtgctgccgcaccggtgcgcgatgcc
agcggccagctgcttggcgtgctcacgctgaccgccacgcctgacaactttaatgcgcat
acgctcggcacggtgcaggcggcagcggaagcggttggccagcagttgatgctgcgccgt
ttgctggccgagcagcagtcgatcctcgaaaccctgaacgaaggcgtgatcgtctgcgat
cgtcacggtcgcatcaaaacgctgaaccgctatgcgcgccagatctttagcagcctcgat
cccagcgccggaccgatcgacgtgctgctgcaaccgcaaggcggatcgctgctcaccatg
ccgttctgcaatgaccgcgagctgcaatttatgccggatggcgtgcatcccctttcctgc
ctgatttcgctgatgcccgcgccagacggtggccgtgtgctgtcgctgcgcgagaatcaa
cgtatccgcgccattacgcgccgcgtgatgggcgtcggcgccagctacacctttgagatg
attcgcgggcacgcgccgcgcgtgctgcaagcgattcagaaagcgcgcgccagcagccgc
agcgacagcacggtgttattaaccggcgaaagcggcaccggtaaagagctgttcgcgcag
gcgattcacaacgccagcccgcgccagcaggaagcctttatcgcgctgaactgcggcgca
ttgccacgtgatctggtgcagagcgaactgtttggctatgtcgacggcgcttttaccgga
tcgcgacgcggcggctcggcgggcaaatttgagctggccgatggcggcaccttgttcctt
gatgagattggcgagatgccgctcgaagcgcaaaccagcctgctgcgcgtgctgcaggag
ggcgaagtggtgcgaatcggcgcggcccatcctatcaaggtcaacgtgcgcatcatcgcc
gctacccactgcaatctgctggatgcggtggaaaaaggcgcgttccgccgcgatctctac
tatcgtctgaatgtgatttcgctggagatcccgccgctgcgcgagcgtcaggaggatatt
cccggcctggtgaatacctttattcaggcgctctgcacccggctgaagcgcatcgcgccg
cagctctccgctgaggcgatgcgctgtttacaggcgtggcactggcccggcaacgtgcgt
gagctggagaatctggtcgagcgtatggtgaatttgtgtgaagggttggagattgagcgc
cacgatctgcctgaagagatggtgcagcgtaacacgcctgtcgccagcgaattgagctcg
ctgcaggagaatgaacgccagcatgtgatgcaggtggtgcgcgagcataaaggcaacctg
cgccagtctgcccagcgactggggatttcacgcaccgcgctgtataataagctgcatcag
tggcaggtggatgtggcggaattgcggcgcggttag
DBGET
integrated database retrieval system
