Pantoea sp. X85: P6287_02560
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Entry
P6287_02560 CDS
T10770
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pane Pantoea sp. X85
Pathway
pane03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P6287_02560 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pane03019
]
P6287_02560 (pnp)
03016 Transfer RNA biogenesis [BR:
pane03016
]
P6287_02560 (pnp)
Enzymes [BR:
pane01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P6287_02560 (pnp)
Messenger RNA biogenesis [BR:
pane03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P6287_02560 (pnp)
Transfer RNA biogenesis [BR:
pane03016
]
Prokaryotic type
tRNA degradation factors
P6287_02560 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
S1_RRP5
Spt6_S1
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
WFL67997
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All DBs
Position
569072..571210
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AA seq
712 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKTKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLISRLIDRPVRPLFPEGFINEVQVIATVVSV
NPQVNPDIVAMIGASAALALSGLPFNGPIGAARVGYINDQYVLNPTADEINESRLNLVVA
GTQNAVLMVESEADILTEEQMLGAVVYGHDQQQIVIENINALVAEAGKPRWDWQPLPTND
ALIARVTALAEAGISDAYRITDKQERYTQVGAVKDATIAALQAEDETLDAGDIADIVHDL
EKSVVRSRIIRGEPRIDGREKDMIRGLDVRTGVLPRTHGSSLFTRGETQALVTATLGTAR
DAQNLDELMGERTDSFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPKQAD
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEADNFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILSVMEQA
ISTPRQEISEFAPRIYTIKISSDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEEITAEIEVGRVYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRVRLSIKEATEQKPAEEVATAASDASDAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaacccgatcgtacgcaaattccaatatggtcagcataccgtcacgctggaaacc
ggcatgatggcgcgccaggctaccgctgcagtaatggtgagcatggatgacactgctgta
ttcgttaccgttgttggccagaaaaaaactaaaccaggtcaggatttcttcccgctgacg
gttaactatcaggagcgtacttacgctgctggtcgtatcccgggtagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatctcacgcctgattgaccgtccagttcgt
ccgctgttcccggaaggcttcattaacgaagtgcaggttattgcaaccgttgtttctgtt
aacccacaggttaacccagacatcgttgcgatgatcggtgcctctgctgcgctggctctg
tcaggcctgccgttcaatggcccaatcggcgcagcgcgcgtgggttatatcaacgatcag
tacgtactgaacccaactgctgatgaaatcaacgaatcacgtctgaacctggttgttgcc
ggtacccagaacgcggtgctgatggtggaatcagaagctgacatcctgaccgaagagcag
atgctgggcgctgtggtatacggccacgaccagcagcagatcgttatcgaaaacatcaat
gcgctggttgccgaagcgggtaaaccacgttgggattggcagccactgccaactaacgac
gcactgatcgcacgcgttactgcactggcagaagcgggcatcagcgacgcttaccgcatc
actgataagcaagagcgttacactcaggttggcgcagtgaaagacgcgaccattgctgca
ctgcaggctgaagatgaaacgctggatgctggcgatatcgctgacatcgttcacgacctt
gagaagagtgttgttcgtagccgcatcatccgtggcgaaccgcgtatcgatggccgtgag
aaagatatgattcgtggcctggatgtgcgcactggcgtactgccacgcacgcacggttct
tcactgtttacccgtggtgaaacgcaggcgctggttaccgcaacgctgggtaccgcacgt
gatgcgcagaatctggatgagttaatgggcgagcgtaccgatagcttcctgttccactac
aacttccctccatactgcgtgggcgaaaccggtatggttggctcaccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtaatgcctaagcaagcggat
ttcccctacaccgtgcgtgtggtttcagaaatcaccgaatctaacggttcttcttcaatg
gcttccgtgtgcggtgcttctctggcactgatggatgctggcgtaccgatcaaagcagcc
gtagccggtattgcgatgggtctggttaaagaagccgacaactttgtggttctgtctgat
atcctgggtgacgaagatcacctcggcgatatggactttaaagtagcgggtagccgcgac
ggtatcactgcgctgcagatggatatcaaaattgaaggcatcacccgcgaaatcatgcag
gttgctctgaaccaagcaaagggtgcgcgtctgcacattctgagcgtgatggaacaggca
atcagcacgccgcgtcaggaaatttctgagttcgcgccgcgcatttacaccatcaaaatc
agttcagacaagatcaaagatgtcatcggtaaaggcggctcagtgatccgtgcgctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgacggtaccgtgaagattgctgctact
gatggcctgaaagccaaagaagccattcgtcgtatcgaagagatcactgctgagatcgaa
gttggccgcgtttactctggtaaagtgacacgtatcgttgatttcggtgccttcgtggca
atcggcggcggtaaagaaggtttggtgcacatctctcagatcgccgacaagcgcgtagag
aaagtgaccgattacctgcagatgggccaggaagttccagtgaaagtgatggaagtggac
cgtcagggccgtgtacgcctgagcatcaaagaagcgacagagcagaaaccagcggaagaa
gttgctaccgctgcatctgatgcatctgacgccgagtaa
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