Pantoea sp. X85: P6287_02570
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Entry
P6287_02570 CDS
T10770
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pane Pantoea sp. X85
Pathway
pane03018
RNA degradation
Brite
Enzymes [BR:
pane01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P6287_02570
Messenger RNA biogenesis [BR:
pane03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P6287_02570
Ribosome biogenesis [BR:
pane03009
]
Prokaryotic type
rRNA helicases
P6287_02570
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WFL67999
LinkDB
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Position
572402..574312
Genome browser
AA seq
636 aa
AA seq
DB search
MTDIQTTFADLGLNADILESLNGMGYVKPSPIQAECIPHLLAGRDVLGMAQTGSGKTAAF
SLPLLNNIDPTVKAPQILVLAPTRELAVQVAEAVTEFSKHMRGINVVALYGGQRYDVQLR
ALRQGPQVVVGTPGRLLDHLKRGTLDLSNLRGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSLTTRPDISQSYWTAYGRKTDALVRFLE
AEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIA
TDVAARGLDVERISLVVNFDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE
RTMKLTIPEVELPNAELLGERRLAKFAAKVQQQLESSDLDQYRALLSKMQPGEDLDIETL
AAALLKMAQGERPLILPPEAPRPARREFSDRPDRGERRDSRDSRGPRESRDSRDGDRPRR
ERRDVGEMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKGMP
GEVLQHFTRTRILNKPMNMQLMGDAPVHERSERRPSAGGERRGNGAPRGDGAPRGEGAPR
RFSERREGGREGGRFSREGGRGPRPEGAAAPRRRDA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattcaaaccacttttgctgaccttggcctgaacgccgacatcctcgaatca
ctgaacggtatgggctacgtaaagccttctccaatccaggctgagtgtattcctcacctg
ctggctggccgtgacgtgttgggtatggcgcagaccggtagtggtaaaactgcggcattc
tcactgccgctgctaaacaacattgatcctactgttaaagcaccgcaaattttggtgctg
gcaccaacccgcgaattggcggtacaggttgctgaagccgtcacagaattctctaaacac
atgcgtggcattaacgtggtagctctgtacggcggccaacgttatgacgtacagctgcgc
gcactgcgtcagggaccacaagttgttgtgggtacccctggtcgtctgctggatcacctg
aagcgtggcacgttagatctgtctaacctgcgcggtctggtgctggacgaagcggatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccattatggcgcagattccagacggt
catcagaccgcgctgttctcagccaccatgccagaagcgattcgtcgtattaccaagcgt
ttcatgaaagatccacaggaagtgcgcatccagtcaagcctgactacgcgcccggacatt
tctcagtcttactggaccgcatacggccgtaaaactgatgcgctggttcgtttcctggaa
gcggaagatttcgatgcagccatcatcttcgtgcgtaccaaaaatgccacgctggaagtg
gccgaagcgctggagcgcagcggttataacagcgcagcactgaacggcgacatgaaccag
gcactgcgtgagcagacgctggagcgtttgaaagatggtcgtctcgacatcctgatcgcg
accgatgttgcagcacgtggtctggacgttgagcgtatcagtctggtcgtaaactttgat
atcccaatggatgcagagtcttacgttcaccgtatcggtcgtaccggccgtgctggtcgt
gcaggtcgtgcgttgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatcgaa
cgcaccatgaagctgaccattccagaagttgagctgccgaacgcagaactgctgggtgag
cgtcgtctggctaagttcgcggctaaagtacagcagcagctggaaagcagcgatctggac
cagtaccgcgcactgctgagcaaaatgcagccgggcgaagatctggatatcgaaacgctg
gccgcagcactgctgaaaatggctcagggcgaacgtccactgattctgccaccagaagca
ccgcgtccagcacgtcgcgagttcagcgatcgtcctgaccgtggtgagcgtcgtgattca
cgtgattctcgtggtccacgcgaaagccgtgacagccgcgatggcgatcgtccacgtcgt
gaacgtcgtgacgttggcgaaatgcagctgtatcgcattgaagtgggccgtgatgatggt
gttgaagttcgtcacatcgttggcgcgatcgctaacgaaggcgacatcagcagccgttac
atcggtaacatcaagctgtttggtactcactcaaccatcgagctgccgaaaggcatgccg
ggcgaagtgctgcagcactttactcgtacgcgtattctgaacaaaccgatgaatatgcag
ctgatgggtgatgcgccagtgcacgagcgtagcgaacgtcgtccatctgctggcggcgaa
cgtcgtggcaatggcgcaccgcgcggtgatggtgctccacgtggcgaaggcgctccacgt
cgcttctccgaacgtcgtgaaggtggccgtgaaggcggacgcttcagccgtgaaggtggt
cgtggcccgcgtccagaaggcgctgctgcaccacgtcgtcgtgacgcataa
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