Pantoea sp. X85: P6287_03425
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Entry
P6287_03425 CDS
T10770
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pane Pantoea sp. X85
Brite
Transcription machinery [BR:
pane03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
P6287_03425 (rapA)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WFL68156
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Position
complement(754582..757488)
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AA seq
968 aa
AA seq
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MVFTLGQRWISDTESELGLGTVVALDTRMITMLFPATGENRLYARNDSPVTRVIFNPGDT
ITSHEGWQMTVDEVRNENDLMTYIGTRLDTEEAGVVMREVMLDSKLVFSKPQDRLFAGQL
DRMDRFALRFRARKYHSEQYRLPISGLRGMRTNLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMIIQQQLLAGRAERVLIVVPETLQHQWLVEMLRRFNLRFALFDDDRYTEAQH
DSDNAFETEQLIICSLDFVRRNKQRLELLADAEWDLLVVDEAHHLAWSEDAPSREYQVIE
QLAEKTAGVLLLTATPEQLGLESHFARLRLLDPNRFHDFGQFVEEQQHYRPVADAVSSLL
ADHAISKDEMNLINDLIGEQDIEPLLQVANSDRDGKEDARKELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHQIRLPLPAQYQTAIKVSGIMGTRKSAEERARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTSNRKEKVLVICAKAATALQLEQVLREREGIRAAVFHEGLSI
IERDRAAAFFASEEDGAQVLLCSEIGSEGRNFQFASRLVMFDLPFNPDLLEQRIGRLDRI
GQMHDIQILVPWLEKTAQAVLLRWYHEGLDAFEHTCPTGRAIYDNEYNQLIEYLAAPENP
QGLDEFISASRKQHDALKAQLEQGRDRLLELNSNGGEAAQELANAIGEQDNDTDLVNFAL
NLFDIVGINQEDRSDSLIVLTPSDHMLVPDFPGLPEEGCTVTFNRNQALSREDTQFITWE
HPLILNGLDLILSGDTGSCALSLLKNKALPVGTLLVEMIYVVEAQAPKSLQLTRFLPPTP
VRLLMDRAGNNLAGKVEFESFNRQLNAVNRHTGSKLVNAVQQDVHEILTQAEKAIVPEAQ
AIIAAAKVEAEEKLGAELSRLEALRAVNPNIRDDEVEALESNREQVLESLGNAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtttttacactgggtcagcgctggattagtgatacggaaagtgaactgggattgggc
acggtggtcgcgctcgatacgcgcatgatcaccatgctttttccggcaaccggcgaaaac
cgcctgtatgcccgaaacgattctccggtcactcgtgtgattttcaatccgggtgacacc
atcaccagccacgaaggctggcagatgaccgtcgatgaagtccgcaacgaaaacgattta
atgacttacatcggcacacgtctcgacaccgaagaagcgggcgtcgtcatgcgcgaagtg
atgctggacagcaaactggtgttcagcaagccgcaggatcgcctgttcgccggtcagctc
gaccgcatggaccgctttgcgctgcgtttccgcgcacgcaaataccacagcgagcaatac
cgcctgccgatcagcggcctgcgcgggatgcgcaccaatttgattccgcatcagctgcac
atcgctcacgatgtcggccgtcgccacgcgccgcgcgtgctgctggcagatgaagtgggc
ttgggtaaaaccattgaagccgggatgatcatccagcaacagctgctggccggtcgtgcc
gagcgcgtgctgattgtggtgccggaaacgctgcaacatcagtggctggtggaaatgttg
cgtcgctttaacctgcgctttgcgctgtttgatgacgatcgctacaccgaagcgcagcac
gacagcgacaatgcctttgaaaccgagcagctgattatctgttcgctcgattttgtacgc
cgtaacaagcagcgtcttgagctgctggccgatgccgagtgggatctgctggtggttgat
gaagcgcaccatctggcatggagcgaagacgcaccgagccgcgaatatcaggttattgag
cagctggcagagaaaaccgctggcgtactgctgctgactgccacgccagaacagctgggc
ttagagagccactttgcacgtctgcgcctgctcgacccgaatcgtttccacgatttcggc
cagtttgtcgaagagcagcagcattatcgtccagtagccgatgcggtgagctcgctgctg
gccgaccacgccatcagcaaagatgagatgaacctgattaacgatctgatcggtgaacag
gatatcgagccgctgctgcaagtggcgaacagcgatcgcgatggcaaagaagacgcgcgt
aaagagctggtctcgatgctaatggatcgccacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtgaaaggcttcccgaaacgcgagctgcaccagattcgtctgccgctg
cccgcgcagtatcaaacagcgattaaagtctccggcatcatgggcacgcgcaaaagcgca
gaagagcgcgcgcgtgacatgctgtatcccgagcagatttatcaggaatttgaaggcgat
agcggcacatggtggaacttcgatccgcgcgttgagtggctgatgggttacctcaccagc
aaccgcaaagagaaagtgctggtgatctgcgccaaagccgccaccgcgctgcagctggag
caggtgctgcgtgagcgcgaaggcatccgtgccgccgtgttccacgaaggcctatcgatt
atcgaacgcgaccgcgcagcggccttcttcgcctccgaagaggatggcgcgcaggtgttg
ctgtgttccgaaatcggttctgaaggccgtaacttccagttcgccagccgtttggtgatg
ttcgatctgccgttcaacccggatctgctggagcagcgtatcggtcgtctcgatcgtatc
ggccagatgcatgacatccagattctggtgccgtggctggaaaaaaccgcgcaggcggtg
ctgctgcgctggtatcacgaaggcttggatgcgttcgaacacacctgcccaactggccgc
gccatttatgacaatgagtacaatcagctgattgaatatcttgctgcgccggaaaatccg
cagggactcgatgagttcatcagcgcaagccgtaagcagcacgatgcgctgaaagcacag
ctggaacagggacgcgatcgcttactggaactgaactccaacggcggcgaagccgctcag
gagctggcaaatgccatcggcgagcaggacaacgataccgatctggttaactttgcgctg
aacctgttcgatatcgtcggcatcaatcaggaagaccgcagcgatagcctgatcgtgctg
acgccgtccgatcacatgctggtgcctgatttccctggcctgccggaagagggttgcacc
gtgacctttaaccgtaaccaggcgctgtcgcgcgaagatacccagtttattacctgggaa
catccgctgatcctcaacggcctcgacctgatcctttcgggcgataccggtagctgtgcg
ctgtcactgctgaagaacaaggcgctgccggtcgggacgctgctggtcgagatgatctat
gtggttgaagcgcaagcgccaaaaagtctgcagctcacccgcttcctgccgccaacgccg
gtgcgtttgctgatggatcgcgccgggaacaatctggcgggcaaagtggagtttgaaagc
tttaaccgtcagctgaatgcggtgaatcgccataccggcagcaagctggtgaatgcggtg
cagcaagacgtgcacgagattctgacccaggccgaaaaagcgatcgttccggaagcgcag
gcgattatcgcggcagcgaaagtggaagccgaagagaaactcggtgctgagctgtcacgt
ctcgaagcgctgcgcgcggtcaaccccaacatccgtgatgacgaggttgaagcgctggag
agcaatcgcgaacaggtgttggaaagcctgggcaatgcaggctggcgtctcgatgcgctg
cgtctgatcgttgtcacgcaccaataa
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