Pantoea sp. X85: P6287_04485
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Entry
P6287_04485 CDS
T10770
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pane Pantoea sp. X85
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pane03009
]
P6287_04485 (dbpA)
Enzymes [BR:
pane01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
P6287_04485 (dbpA)
Ribosome biogenesis [BR:
pane03009
]
Prokaryotic type
rRNA helicases
P6287_04485 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WFL68343
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All DBs
Position
complement(992174..993553)
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AA seq
459 aa
AA seq
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MTAFSTLTQLPASQLDNLREMGFDAMTPIQAASLPAILEGRDVRAQAKTGSGKTAAFGVG
LLNRIDNSQFHTQALILCPTRELADQVSNVLRQLARFTRNIKILTLCGGQPMSAQRDSLV
HAPHIVVGTPGRLLDHLKRDNLDLSQLQTLVLDEADRMLEMGFRDDMEAIIGFTPETRQT
LLFSATWPDTIASLSQRFQRDALAVATEDKTELPTIEQQFIEASAKERHSLLGALLSQQQ
PASCVVFCNTKRECDDVAAALNERDISALALHGDLEQRDRERVLIRFANGSIRVLIATDV
AARGLDIKSLALVVNFQLAWDPEVHIHRIGRTGRAGEKGLAVSFVAPDEMVRANALEEYL
QQKLNWVSSSSLKGTSAKSLPATKMTLCIDGGRKAKIRPGDILGALTGEAGFSGDQIGKI
DMTATHAYVAIDAAQAKKALIKLKEGKIKGKSVRAILLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgactgctttttctaccctgacgcaactgcccgccagccaactcgataacctgcgcgag
atgggtttcgacgccatgacgccgattcaggccgcttccctgcccgcgattctggaaggg
cgcgacgtgcgtgcgcaggcgaaaaccggcagtggcaaaaccgccgcctttggcgtgggt
ttgctgaaccgcatcgataacagccagttccacacccaagcgctgattctgtgcccgacg
cgtgagctggccgatcaggtcagcaacgtgctgcgtcagctggcgcgttttacccgcaac
atcaaaattctgacgctgtgcggcggccagccgatgagcgcgcagcgtgattccttagtg
catgcgccacatatcgtggtcggcacgccgggccgtttgcttgatcacctgaagcgcgac
aaccttgatctcagccagctgcaaacgctggtgctggatgaagccgatcgcatgctggag
atgggcttccgcgacgacatggaagcgatcatcggctttacgccagaaacacgccagacg
ctgctgttttctgccacctggccggataccatcgccagtctcagccagcgttttcagcgc
gatgcgctggcggtcgccaccgaagataaaaccgagttaccgaccatcgagcagcagttt
attgaagccagcgccaaagagcgccacagcctgctcggcgcgctgctcagccagcaacaa
ccggcctcatgcgtggtgttctgtaacaccaagcgcgagtgtgacgacgttgctgccgcg
ctgaacgagcgtgatatcagtgcgttagcgctgcatggcgatctggagcagcgcgatcgt
gagcgcgtgctgattcgcttcgccaacggcagcatccgcgtattgatcgccaccgacgtc
gctgcacgcggtctggatattaaatcgctggcgctggtggtgaatttccagctggcgtgg
gatccggaagtgcacattcatcgcatcggccgtaccggtcgcgccggtgagaaagggttg
gcggtaagctttgtcgcccccgacgaaatggtgcgcgccaatgcgctggaagagtatctg
cagcagaagctcaattgggtttcctccagctcgctgaaaggcaccagcgccaaatcgttg
ccggcgaccaaaatgacgctgtgtattgatggcggccgtaaagccaaaatccgtccgggc
gatattctcggcgcgctgaccggtgaagccggttttagcggcgaccagatcggcaagatc
gatatgaccgccacccacgcctatgttgccatcgacgccgctcaggcgaagaaagcgctg
atcaagctgaaagagggcaagatcaaaggcaaaagcgtgcgcgccattctgctgaagtaa
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