Pantoea sp. X85: P6287_04725
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Entry
P6287_04725 CDS
T10770
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pane Pantoea sp. X85
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pane03400
]
P6287_04725 (sbcD)
DNA repair and recombination proteins [BR:
pane03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P6287_04725 (sbcD)
Archaeal homologous recombinant proteins
P6287_04725 (sbcD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WFL68388
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Position
complement(1039945..1041162)
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AA seq
405 aa
AA seq
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MRIIHTADWHLGQFFYSKSRAREHQAFLDWLLDQIVQHQVDALIIAGDLFDTGSPPSYAR
EMFNRFVVALQPSGCQLVVLAGNHDSVATLNESRELLACLNTQVITSATPQGEQQVLTLK
QRDGAPGALLCAIPYLRPRDILRSQAGQSGREKQISLLEAIEQHYQHCFAAAQAQRDAQD
VTLPIIATGHLTTVGVTKSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQRIANSEH
IRYSGSPIPLSFDELGREKSVFLLEFSTTLDTVTPLTIPHFQPMQMLKGSMAEIEHQLAQ
FSASASEQPVWLDIEITTQEYLSDLQRRIEALTENLPVEVLLVRRSREQRQRSLERLENE
TLSELKVEDVFARRLAQEEQLDAGQAEQLTQLFRTQLAALENPSA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcacaccgctgactggcatctcggtcagttcttttacagcaaaagtcgc
gcgcgggaacatcaggcgtttctcgactggctgctggatcagattgtgcagcatcaggtg
gatgcgctgattatcgccggcgacctgtttgataccggttcgccgccgagctacgcgcgt
gaaatgtttaaccgttttgtggtggcgctgcagccaagcggctgtcaattggtggtgctg
gcgggcaatcacgactcggtggcgacgctgaatgaatcgcgcgagctgctggcctgcctg
aatacgcaggtgatcaccagcgccacgccgcagggcgaacagcaggtgttaaccctgaag
cagcgcgatggcgcgccgggcgcgctgctgtgcgccattccttatctgcgtccgcgcgac
attctgcgtagccaggctggccaatccggccgcgagaagcagatctcgctgctggaggcg
atcgagcagcattatcagcactgctttgctgccgcgcaggcgcagcgcgatgcgcaggac
gttacgctgccgatcatcgccaccggccatctcaccaccgttggcgtgactaaaagcgat
tcggtgcgcgacatctatatcggcacgctggatgccttcccggcgcaggcgtttccgccc
gccgattacatcgcgctcggtcacatccatcgcgcccagcgcatcgccaacagcgagcac
attcgttacagcggctcgccgattccgctcagttttgatgagcttggccgcgagaaaagc
gtcttcctgctggaattcagcaccacgctcgataccgttacgccgctaaccatcccgcac
ttccagccgatgcagatgctgaaaggctcgatggcggagattgaacatcagctggcgcag
ttcagcgcgagcgccagcgaacagccagtctggctggatattgagatcaccacgcaggaa
tatctcagcgatctgcaacgtcgcattgaagcgctcaccgaaaatctgccggtcgaagtg
ctgctggtgcgccgcagccgcgaacagcggcagcgcagcctcgaacggctggagaacgaa
accctgagcgaactaaaagtggaagacgtgtttgcgcgccgactggcgcaggaagaacag
ttggatgccgggcaggccgagcagttaacgcagctgttccgcacccagcttgccgcgctg
gagaatccatccgcatga
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