Pantoea sp. X85: P6287_05810
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Entry
P6287_05810 CDS
T10770
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pane Pantoea sp. X85
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pane03400
]
P6287_05810 (phrB)
Enzymes [BR:
pane01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
P6287_05810 (phrB)
DNA repair and recombination proteins [BR:
pane03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
P6287_05810 (phrB)
Prokaryotic type
P6287_05810 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF7376
Motif
Other DBs
NCBI-ProteinID:
WFL68588
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All DBs
Position
1258980..1260407
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AA seq
475 aa
AA seq
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MTTHLVWLRNDLRINDNMALAAACRDSQTKVIALFIATPQQWQQHHMAPKQAAFIQQNLS
LLQKSLAERGIPLHFHQCDDFAASIEYLAKFCQQQRVDALFYNYQYEINERERDAQAEKR
LDAQGVICQGFDDSLLLPPGSVQTGSNTMFKVFTPFSKAFVRRLHQGLPECHQAPKARDG
APISIEKKIPAFDYPCEAFDESLFPAGEEAALKQLRHFAKQAVQHYPDQRDLPAIDGTSR
LSVYLTTGVLSPRQCLHRVLKEHPDALNEGKAFTWLNELIWREFYRHLMVAFPALCKHQP
FVDWTRNVDWQQNDGHLKAWQQGKTGYPIVDAAMRQLNTFGWMHNRLRMITASFLVKDLL
IDWREGERYFMQQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKQGEFIR
QWLPELSDVPDSDIHQPQVWAQKNNKKLDYPAPIVEHKDARKKTLDAFERARSAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatttagtttggctgcgcaacgatctgcgcatcaatgacaacatggcgttg
gccgctgcctgccgcgatagccagaccaaagtgattgcgctgtttatcgccacaccgcag
cagtggcagcaacaccatatggcgccaaagcaggcggcgttcatccagcaaaatctcagc
ttgttgcagaagtcactggctgaacgcggcattcctctgcatttccatcagtgtgatgac
tttgccgcttcgattgaatatctggcgaaattttgccagcagcagcgggttgatgcgctg
ttctacaattaccagtatgaaatcaacgagcgtgaacgcgatgcgcaggcggagaaacgt
ctggatgcgcagggcgtaatatgtcagggattcgatgacagcttgctgttgccgccgggc
agcgtgcaaaccggcagcaacaccatgttcaaagtgttcacgccgttcagcaaagccttt
gttcgtcgtttacatcagggcttaccggagtgccatcaggcaccgaaagcgcgtgatggt
gcgcccatcagtatcgaaaagaagattcccgcttttgattatccttgtgaagcctttgat
gaaagcctgttcccggcgggagaagaggcggcgttaaaacagctgcgccacttcgctaaa
caggcggtgcagcattatccggatcagcgtgatttaccggccattgacggcaccagccgc
ttatcggtttatctaaccactggcgtgctgtcgccgcgccaatgtcttcatcgcgtgctc
aaagagcatcccgatgctctcaacgagggcaaggcctttacctggctgaacgaactgatc
tggcgcgaattctatcgtcatctgatggtggcgtttccggcgctgtgcaaacatcagccg
tttgtcgactggacgcgcaacgtggattggcagcaaaacgacgggcatctcaaagcctgg
caacagggcaaaaccggctatccgattgttgatgcggcgatgcgccagctcaacacgttc
ggctggatgcataatcgcttgcgcatgattaccgccagtttcctggtgaaggatctgctg
atcgactggcgtgaaggtgagcgttatttcatgcagcagctgatcgatggcgatctggcc
gccaacaatggcggctggcagtgggccgcgtcaactggcaccgatgccgcgccctatttt
cgtatcttcaatcccaccacgcagggcgagcgcttcgataaacagggcgagtttattcgt
cagtggctgccggaactcagcgacgtgcccgacagcgatatccatcagccgcaagtgtgg
gcgcagaaaaataacaagaaactcgattatcccgcgccaatcgtggaacataaggacgca
cgtaaaaagacactagacgcctttgagcgcgctcgcagcgcggcttga
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