Pantoea sp. X85: P6287_10185
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Entry
P6287_10185 CDS
T10770
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pane Pantoea sp. X85
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pane03016
]
P6287_10185
Enzymes [BR:
pane01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
P6287_10185
Transfer RNA biogenesis [BR:
pane03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
P6287_10185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
WFL65758
LinkDB
All DBs
Position
2191481..2193415
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKEKLHAQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
SAVIHTDKDRESAEPETLVEPFLTRFVGRVQKKDDRLSIVPDHPLLKEAIQCRAERGVTH
DFQNGDWAVAEMRRHPLKGDRGFYAELTEFIVTADDHLAPWWVTLSRHNLERQAPDVGFG
EMLDENLQREDLTALNFVTIDSASTQDMDDALYVEEAADGNLILTIAIADPTAYVAEGSE
LDKLASKRAFTNYLPGFNIPMLPRELSDDVCSLRPNERRPALACRVTVLKDGSLADDVHF
FAAWIESKAKLVYDEVSDWLENSGSWQPENDAIAQQIRLLHQVCLARSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIISEPRRIANRIVEESMILANVCAAKVLQEKLGFGIYNLHTGFD
LANAEQAAGVLAGHGITVDPQAITTLEGFRQLRRQLDAQPTQYLDSRIRRFQSFAEVGTE
PGPHFGLGLEAYATWTSPIRKFGDMINHRLLKAIVRGESTGRPQDELTTIMSERRRLNRM
AERDVGDWLYARFLAPFAATDRKFSAEIIDVSRGGMRVRLLENGAVAFIPAPFIHAVRDE
LVCSQESGTVQIKGEVAYRVTDIIDVTIAEVRMETRSVVARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataatccgctgctcgcgcagcttaaagagaagcttcacgcgcagactccg
cgcgtcgaaggtgttgttaaaggtacggaaaaaggctttggcttcctcgaagttgatgcc
cagaaaagctacttcattccgccaccgcagatgaagaaagtgatgcacggcgaccgtatt
tcggccgtgatccacaccgataaagaccgcgagagtgccgagccggaaaccctggttgag
ccgttcctgacccgctttgtcggccgcgtgcagaagaaagacgatcgcctgtcaattgtg
ccggatcatccgctgctgaaagaggcgattcagtgccgcgccgaacgtggcgtgacccac
gatttccagaacggcgattgggcggtagcagagatgcgtcgtcacccactgaaaggcgat
cgcggtttctatgctgaactgaccgaattcattgtcactgcggacgatcacctcgcgccg
tggtgggtaacgttgtcgcgccataacctcgaacgtcaagctccggacgtcggttttggt
gagatgctcgacgaaaatctgcagcgtgaagatttgaccgcactgaacttcgtcaccatc
gacagcgccagcacccaggatatggatgatgcgctttacgtggaagaggctgccgacggc
aatctgatcctgaccatcgccatcgccgatccaaccgcttacgtggcagaaggcagcgag
ctggataagctggcgtcgaaacgcgcgttcaccaactatctgccgggcttcaacattccg
atgctgccgcgcgaactctctgacgacgtctgttccctgcgtccgaacgagcgtcgtccc
gcgctggcatgccgcgttaccgtacttaaagatggtagcctggctgatgacgtgcatttc
tttgctgcgtggatcgagtcgaaagccaagctggtttatgacgaagtttccgattggctg
gaaaacagcggcagctggcagcctgagaacgatgccattgctcagcagattcgcctgctg
catcaggtgtgcctggcgcgcagcgaatggcgtcaaacccacgcgctggtgtttaaagat
cgtccggactaccgctttgtgttgggcgaaaaaggcgaagtactggatatcatctctgag
ccacgtcgcatcgcgaaccgcatcgtggaagagtcaatgattctggctaacgtctgtgcc
gcgaaagtgctgcaggagaagctgggcttcggtatctataacctgcacaccggtttcgat
ctggccaatgctgagcaggccgctggcgtgctggcagggcatggcatcaccgtggatccg
caggcgattaccacgctggaaggcttccgccagctgcgtcgtcaactcgatgcgcagcca
acccagtatctggatagccgcattcgtcgcttccagtcatttgcagaagtcggcaccgag
ccgggcccgcactttggtcttggcctcgaagcctacgcgacctggacttcgccgattcgt
aagttcggcgacatgatcaaccatcgcttgctgaaggcgatcgtgcgcggtgaaagcact
ggccgtccgcaggatgagctgaccaccatcatgagcgaacgtcgtcgcctgaaccgcatg
gccgagcgcgatgttggggactggttgtatgcacgtttcctcgcaccgtttgccgctacc
gatcgcaagttcagcgccgagatcatcgacgtgtctcgcggcggcatgcgcgttcgtctg
ctggagaatggcgcggtagccttcattcctgcgccgttcatccacgcggtgcgtgatgag
ctggtgtgctcgcaggaaagcggcaccgtgcagataaaaggtgaagtcgcttaccgtgtc
actgacatcatcgacgtgaccatcgccgaagtgcgtatggaaacccgcagcgtggtcgcg
cgtccggccgcctga
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