KEGG   Pantoea sp. X85: P6287_11515
Entry
P6287_11515       CDS       T10770                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pane  Pantoea sp. X85
Brite
KEGG Orthology (KO) [BR:pane00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pane02044]
    P6287_11515 (tssC)
Secretion system [BR:pane02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   P6287_11515 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 SurA_N_3
Other DBs
NCBI-ProteinID: WFL66005
LinkDB
Position
complement(2472600..2474147)
AA seq 515 aa
MLMSVQNETHANGATTVLDRPAAGGVYASLFEKINLNPVSELSDLNVWQDNQAMSDATAD
ERVTAAMQVFLTRLKISGAKVEKLDKNLLDHHIAELDRQISRQLDAVMHHDEFQKVESAW
RGLKSLVDKTDFRQNVKIEVLDVSKDDLRQDFEDAPEIIQSGLYLQTYVAEYDTPGGEPI
GAVISAYEFDASAQDVALLRNLSKVAASAHMPFIGSVGPQFFLKESMEEVAAIKDIGNYF
DRAEYIKWKSFRDTDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYIEEVKGPDHDKYLWT
NASFAFAANMVQSFISNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETR
EFEFANLGFIPLSYYKNRDYACFFSANSTQKPALYDTADATANSRINARLPYIFLLSRIA
HYLKLIQRENIGTTKDRRLLELELNTWVRTLVTEMTDPGDELQSSHPLRDAKVLVEDIED
NPGFFRVKLFAIPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgctgatgtcagttcagaatgaaacccatgccaatggtgcaaccaccgtgctggatcgc
ccggctgcgggcggcgtctacgcttcgctgtttgaaaaaatcaacctcaacccggtgtca
gagctgagtgatctcaacgtctggcaggacaatcaggcgatgtctgatgccaccgccgac
gagcgcgtcaccgccgcgatgcaggtgttcctgacgcgtctgaaaatcagcggtgcgaaa
gtagagaagctggataaaaatctgctggatcaccacatcgccgagctggaccgccagatc
agccgccagctcgatgcggtgatgcaccatgatgaattccagaaagtggagtcggcgtgg
cgcggcctgaagtcgctggtggataaaactgacttccgccagaacgtgaaaattgaagtg
ctggacgtgtcgaaagacgacctgcgtcaggactttgaagacgcgccggaaatcatccag
agcggcctctatctgcaaacctacgtcgccgaatacgacacgccgggtggcgagccgatt
ggtgcggtgatttcagcttacgagttcgatgcctcggcgcaggacgtggcgctgctgcgc
aacctgtcgaaagtcgcggcgtcagcacacatgccgtttatcggttcggtcggcccgcag
tttttcctcaaagagtcgatggaagaagtggcggcgatcaaagacatcggcaactacttt
gaccgcgctgagtacatcaagtggaagtcattccgcgacaccgatgactcacgctacatc
ggcctgaccatgccgcgcgtactcggtcgtctgccgtacggcccggacaccgtgccggtg
cgcagcttcaactacatcgaagaagtgaaaggtccggatcacgacaaatacctgtggacc
aatgcctcgttcgccttcgccgccaacatggtgcagagctttataagcaacggctggtgt
gtgcaaattcgcggcccgcaggccggtggtgcggtgcaggatctgccgatccatctgtac
gatttgggcaccggcaaccaggtgaaaatcccgtccgaagtgatgatcccggaaacccgc
gaattcgagtttgctaacctcggctttatcccgctctcttattataagaaccgcgattac
gcctgcttcttctcggccaactcaacgcaaaaaccggcgctgtatgacaccgccgatgcc
accgccaacagccgcatcaacgcgcgtctgccttacatcttcctgctgtcgcgcatcgct
cactacctgaagcttattcagcgcgaaaacatcggcaccaccaaagaccgccgcctgctg
gagctggagctcaacacctgggtgcgcacgctggtgaccgagatgaccgatccgggcgac
gagctgcagtcttcacatccgctgcgcgatgcgaaagtgctggtggaagatatcgaggac
aacccgggcttcttccgcgttaagctgttcgccatcccgcacttccaggtggaaggcatg
gacgtgaacctgtcgctggtttctcagatgccgaaagctaaagcgtaa

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