Pantoea sp. X85: P6287_15175
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Entry
P6287_15175 CDS
T10770
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pane Pantoea sp. X85
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pane03016
]
P6287_15175 (truD)
Enzymes [BR:
pane01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
P6287_15175 (truD)
Transfer RNA biogenesis [BR:
pane03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
P6287_15175 (truD)
Prokaryotic type
P6287_15175 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WFL66683
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All DBs
Position
complement(3242280..3243323)
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AA seq
347 aa
AA seq
DB search
MSELHYLHGVPTATGVIKANPEDFVVIEDLGYPYDGEGEQLLVRIRKIGCNTRFVAEAIA
KFLGVPVRDLSYAGMKDRHAVTEQTLCFRVPGNGMPNLAGFQLEGVEILQVIRHKRKLRT
GALAGNAFRLVVRQISNRREVDARLQQIQQRGVPNYFGEQRFGRGGNNLTQAKQWAKETF
RPRDRNMKGLLLSATRSHLFNQVTSARLQRDGALDVVQVGDAVQLAGRGSWFVAQAEELP
DLQQRIDNHQLRITAPLPGRGDAGPQGDALLFEQQSLAGAEELITLLERERVDAARRAML
VVPKDLRWEWWDDVTLEMQFWLPAGSFATSVVRELLQQEGNDADIAE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgcattacctgcacggcgtgccgactgccaccggcgtcatcaaagccaat
cccgaagatttcgtggtgattgaagatcttggctatccctatgatggcgaaggtgaacag
ctgttggtgcgcatccgcaaaattggctgcaatacgcgctttgtcgctgaagccatcgcc
aaatttctcggtgtgccggtgcgcgaccttagctatgccggcatgaaagatcgtcatgca
gtcaccgagcaaacactctgtttccgcgtgcccggcaatggcatgccgaatctggcggga
ttccagttggaaggcgttgaaatcctgcaggtgattcgccacaaacgcaaactgcgtacc
ggcgcgctggcgggcaatgcgttccgcttagtggtgcgtcagatctccaatcgccgtgaa
gtcgacgcacgtttacagcagattcaacagcgcggcgtgccgaactactttggtgagcag
cgctttggtcgtggcggcaacaacctgacgcaggcgaaacagtgggcgaaagagacattc
cgtccgcgcgatcgcaatatgaaaggtttgctgttgtcagcgacccgcagccatctgttt
aatcaggtgaccagcgcgcgtttgcagcgtgatggcgcactggatgtggtgcaggtgggc
gatgcggtacagctggccggtcgcggcagctggttcgtggcgcaggcggaagagttgcct
gacttgcagcagcgcatcgataatcatcaactgcgcatcactgcgccgctgccgggtcgc
ggtgatgcgggtccgcaaggcgacgcgctgctttttgagcagcaaagcctggcaggcgca
gaagaattgattacactgcttgagcgcgagcgggttgatgccgcgcgtcgtgcaatgctg
gtggtgccaaaggatctgcgctgggaatggtgggacgatgtgacgctggagatgcagttc
tggctgcccgcgggcagttttgccaccagcgtggtgcgtgagcttctccaacaagaaggt
aacgatgcggatattgctgagtaa
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