Pantoea sp. X85: P6287_15425
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Entry
P6287_15425 CDS
T10770
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pane Pantoea sp. X85
Pathway
pane03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P6287_15425 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pane03400
]
P6287_15425 (recB)
Enzymes [BR:
pane01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P6287_15425 (recB)
DNA repair and recombination proteins [BR:
pane03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P6287_15425 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WFL66729
LinkDB
All DBs
Position
complement(3295917..3299456)
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AA seq
1179 aa
AA seq
DB search
MSLLPESLNPLTLPLRGERLIEASAGTGKTFTIGLLYLRLLLGLGGQHAYSRPLSVEEIL
VVTFTEAATAELRGRIRANIHELRLACLRGVSGNPMLMQLLQEIPQPADAASLLLAAERQ
MDEAAIFTIHGFCQRMLNLNAFESGMLFEQQLIEDEQLLLRQATADFWRRHCYPLTLDVA
RVIVSEWNGPEQLLSTLRPWLQGESPSLRLPPTDSETLASRHSENLARIAAMKAQWLTVG
DEVLTLVGQSDVDKRSYSSKNLPVWVNKVSFWAQSETLDYQVPAELARFGQRMLEEKTKK
GNPPHHSVFDAIDTFLVQPLSLRDLVIARALVEVRAAVRKEKRQQALLGFDDLLSRLDEA
LQQPSGEQLAQAIRQRFPVALIDEFQDTDPLQYRIFRTLYINQPAHALLLIGDPKQAIYA
FRGADIFTYIRARSEVSAHYTLDTNWRSSPAMVNSVNHLFARLDAPFLFAEIPFQPVQFA
PPNQQLSLSIDQVEQAALRFWLQPGEGCSVGDYQQRMAQQCAADISRWLQAGQQQRAMLG
KAPNLRPVQASDITVLVRSRNEANLIREALNLLGIPSVYLSNRDSVYTTPEARELLWLLQ
AVLAPEQERMLRTALATSLFAFDASQLDALDQDARGWDELVDTFARWQLVWQQRGVLPML
REMMLERQLAENLLASENGERRLTDLLHLGELLQEAAAQLDSPHALVRHLAQQIARPDSQ
SASQQLRLESDRHLVQIVTIHKSKGLQYPLVWLPFAAGFREADTALYHDRESFNAVLDLQ
ADEESLALAEQERLAEDLRLLYVALTRSIYHCSVGVAPLFRGTRKKEGESDLHKSALGFL
LQRGVAATAEQLGALLHNMDAAGTEVVLAEDMQAERWQVEAVADSELGARSVTRVLADPW
RVTSYSGLQQHSSHRLLEVMPNFDVEAAGEEDREEEGEAALTPHHFPRGAAPGTFLHELF
ESLDFPQPPSEEKLAQHLQQNGYPLHWQPMLSAWIRRVLSTPLNVQGIHLAQVQSSDRLV
EMAFYLPIDNVLTARELSALIAQDALSAQAPPLDFRQVQGMLKGFIDLVFRWQGKYYLLD
YKSNWLGDSHEAYTPQAMAQAMIDHRYDLQYQLYTLALHRYLQHRVPDYDYEQHFGGVFY
LFLRGMDGSSPDNGVFHTRPTFDFISQLDSLFRGPGATA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctacctgaatcgctcaatcctctgacgctgccgctgcgcggtgagcgtctg
attgaggcctcagccggcaccggcaaaaccttcaccatcggcctgctctatctaaggctg
ctactgggattgggcggacaacatgcttattcgcgcccgttgtcggtagaagagattctg
gtcgtgacctttaccgaggccgcgaccgctgaactgcgcgggcgtatacgcgccaacatt
cacgagctgcggctggcctgcctgcgcggcgtcagcggcaacccgatgctgatgcagctg
ctgcaggagattccacagcccgccgatgcggcttcgctgctgctggccgctgaacgacag
atggatgaagccgccatcttcaccatccacggcttctgccagcgcatgctgaatctcaac
gcctttgagtccggcatgctgtttgaacagcagctgattgaggatgaacagctgctgctg
cgccaggcgactgccgatttctggcgtcgtcactgctatccgctgacgctggatgtcgcg
cgagtgattgtcagcgaatggaacggcccggagcagttgctttccaccttgcgtccgtgg
ttgcagggcgaatcgcccagcctgcgtctgccgcctaccgacagtgaaaccctggcttcg
cgccacagcgaaaacctggcgcgtatcgccgcgatgaaagcgcaatggctgacggtgggt
gacgaagtgctgacgctggtggggcaatctgacgtggataagcgcagctacagcagcaag
aatttgccggtttgggtcaataaagtcagcttttgggcgcagagcgaaacgcttgattat
caggtgcccgccgaactggcgcgcttcggtcagcgcatgcttgaagagaagaccaaaaag
ggcaatccgccgcatcacagtgtgtttgacgccatcgacactttccttgttcagccgctg
tcgctgcgcgatctggtgattgcgcgtgcgctggtagaggtgcgcgctgcggtgcgcaaa
gagaaacgtcagcaggcactgttgggttttgatgacctgctgagccgcctcgacgaagca
ctgcagcagccgagcggtgagcaactggctcaggctattcgccagcgtttcccggtggcg
ctgattgatgagttccaggataccgatccgctgcaataccgcattttccgcacgctttat
atcaatcagccagcgcatgcgctgctgttgattggcgatcccaaacaggcgatttacgcc
tttcgtggcgcggatatttttacttatatccgcgcgcgcagtgaagtcagtgcgcactac
acactggataccaactggcgctcgtcgcctgcgatggtcaacagcgttaaccatctattt
gcgcgcctcgacgcgcccttcctgttcgctgagatcccgttccagccggtgcagtttgcg
cctcccaaccagcaactgtcgctcagtatcgatcaggttgagcaagcggcgttacgcttc
tggctgcagccgggtgaaggctgcagcgttggagattatcaacaacgtatggcgcagcag
tgtgcggccgatatcagtcgctggttgcaggccgggcagcagcagcgcgcgatgctgggc
aaagcgcccaatttgcggccggtacaagcctctgacatcacagtgttagtgcgcagccgt
aacgaagctaacctgattcgcgaagcgctcaatctgctcggtattccgtcggtttacctg
tcgaatcgcgacagcgtttacaccacgccggaagcgcgagagctgttatggctgttgcag
gcggtactggcaccggagcaggagcgtatgctgcgcactgcactggcaacctcgctgttt
gcttttgatgcctcgcagctggatgcgctggatcaggacgcgcgcggctgggatgaactg
gtggatacctttgcccgctggcagctggtgtggcagcagcgtggcgtcttgccgatgctg
cgcgagatgatgctggagcgtcagctggcggaaaatctgctggcatcggagaacggcgag
cgtcgtctgacggatttactgcatctcggcgaactgctgcaggaagcggctgcgcagctg
gatagcccacacgcgctggtgcgtcatctggcacagcagatcgcccgcccggatagccag
tctgccagccagcaactgcgtctggagagcgatcgtcatctggtgcagattgtcaccatc
cacaaatctaaagggctgcaatatccgttagtgtggctgccattcgccgccggttttcgc
gaggcggataccgcgctttatcacgatcgtgagagctttaacgcggtcctggatctgcaa
gccgatgaagagagcctggcgctggccgaacaggagcgtctggcggaggatttgcgtctg
ctctacgtggcgttgacccgttcgatctatcactgcagcgtcggcgtggcaccgctgttt
cgcggcacgcgcaagaaagagggcgagagcgatttgcataaaagcgcgctcggttttctg
ttgcagcgcggtgtagcggcaacagccgaacagctcggcgcgttgctgcataacatggac
gcggcgggcaccgaagtggtgctggccgaagatatgcaagccgagcgctggcaggttgag
gcggtcgccgatagcgagttgggggcgcgaagcgtaacgcgcgtgctggccgacccgtgg
cgcgtcaccagttattccggtttgcagcagcacagttctcaccgtctgcttgaggtgatg
ccgaatttcgatgtggaagcagccggcgaagaggatcgggaagaggaaggggaagcggcg
ctcacgccccatcacttcccgcgcggtgccgcgccgggaacgtttttgcatgagctgttc
gaatcgctggatttcccgcagccgccttccgaggagaagctggcgcaacatctgcagcaa
aacggctatccgctgcactggcagccgatgctcagtgcgtggatcaggcgtgtattgagc
acgccgcttaacgtgcagggtattcatctggcgcaggtgcagagcagcgatcgtttggtg
gagatggcgttctatctgccaattgacaacgtgctgaccgcgcgtgaactgagcgcgttg
attgctcaggatgcgttatcggcgcaggctccgccgctcgatttccgtcaggtgcagggc
atgctgaaaggctttatcgacctggtgttccgctggcagggcaaatattacctgctggat
tataaatccaactggctcggtgacagccatgaagcttatacgccgcaggcaatggcgcag
gcgatgatcgaccaccgctacgatttgcagtaccagctctatacgctggcgctgcaccgc
tatttacaacatcgcgtgccggattacgattatgagcagcatttcggcggcgtattttat
ctcttcctgcgtggcatggacggcagctcgccagacaacggcgtgtttcatacccgtccc
accttcgacttcatttcacaactggatagcctgtttcgcgggccgggagcgacagcatga
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