Pantoea sp. X85: P6287_18980
Help
Entry
P6287_18980 CDS
T10770
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pane Pantoea sp. X85
Pathway
pane00541
Biosynthesis of various nucleotide sugars
pane01100
Metabolic pathways
pane01250
Biosynthesis of nucleotide sugars
Module
pane_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
P6287_18980 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pane01005
]
P6287_18980 (rfaD)
Enzymes [BR:
pane01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
P6287_18980 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pane01005
]
Core region
P6287_18980 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
WFL67392
LinkDB
All DBs
Position
complement(4071411..4072343)
Genome browser
AA seq
310 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNDRGLTDILVVDNLKDGTKFVNLADLDIADYMDKEEFLSYI
MSGEDLGPIEAVFHEGACSATTEWDGKYMMDNNYQYSKDLLHFCLEREIPFLYASSAATY
GGRNENFIEERQYEQPLNVYGYSKMLFDHYVRQILPEADSPVCGFRYFNVYGPREGHKGG
MASVAFHLNTQISNGENPKLFEGSDDFRRDFIHVDDVVAVNLWCWENGVSGIYNCGTGRA
ESFQEVADAVLNFHQKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAQGVG
EYMAWLNRNV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaaccggtggcgctggcatgattggcagcaacattgttaaagcgctgaac
gaccgcggtctgaccgacattttggtggtggataatctgaaggatggcaccaagttcgtg
aatctggcggatctcgacatcgccgattacatggataaagaggaattcctcagctacatc
atgtctggcgaagatctcggccccatcgaagccgtgttccatgaaggtgcgtgttccgca
accaccgagtgggatggcaagtacatgatggataacaactatcagtactcgaaagatctg
ctgcacttctgcctcgagcgcgaaatcccgttcctctacgcctcatctgctgccacttac
ggcggccgcaatgagaacttcatcgaagagcgccagtacgagcagccgctgaatgtgtac
ggctactcaaaaatgctgttcgatcactacgtgcgccagattctgcctgaagcagactca
ccggtgtgcggcttccgttacttcaacgtgtacggtccgcgtgaaggccacaaaggcggc
atggcgagcgtcgcgttccacctcaatacgcaaattagcaacggtgaaaatccaaaacta
ttcgaaggcagcgacgatttccgccgcgacttcatccatgttgatgacgtggttgcggta
aatctgtggtgctgggaaaacggtgtttccggtatctacaactgcggaactggccgtgct
gaatctttccaggaggtggcggatgcggtgctgaacttccatcagaaaggccagattgaa
tacattccgttcccggacaagctgaaaggccgttatcaggcgtttacccaagccgatctc
accaatctgcgtgcagccggttacgacaagccgttcaaaaccgttgcgcaaggcgtgggc
gaatatatggcctggctgaaccgtaacgtataa
DBGET
integrated database retrieval system
