Pantoea sp. X85: P6287_19455
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Entry
P6287_19455 CDS
T10770
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pane Pantoea sp. X85
Pathway
pane03030
DNA replication
pane03410
Base excision repair
pane03420
Nucleotide excision repair
pane03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pane00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P6287_19455 (polA)
03410 Base excision repair
P6287_19455 (polA)
03420 Nucleotide excision repair
P6287_19455 (polA)
03440 Homologous recombination
P6287_19455 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pane03032
]
P6287_19455 (polA)
03400 DNA repair and recombination proteins [BR:
pane03400
]
P6287_19455 (polA)
Enzymes [BR:
pane01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P6287_19455 (polA)
DNA replication proteins [BR:
pane03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
P6287_19455 (polA)
DNA repair and recombination proteins [BR:
pane03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
P6287_19455 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P6287_19455 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WFL67484
LinkDB
All DBs
Position
complement(4157849..4160641)
Genome browser
AA seq
930 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLKSLLMQYQPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVKAMGLPLLAVSGVEADDVIGT
LALEAEKLGRPVLISTGDKDMAQLVTPAITLINTMTNIVLGPEEVEQKYGVPPALIIDFL
AMMGDSSDNIPGVPGVGEKTAQALLQGLGGMQSIYDNLDKVADLSFRGAKTMAAKLEQNR
DVAFLSYQLATIKTDVELDLTCDQLVVNEPNVEALQTLFSRYEFKRWITDLQDGSWLQQG
KKSNAQAKKPQLSEPAAPAAEATSVLSADGYVTILDEATFAAWLKKLKSAELFAFDLETD
SLDTLSANIVGIGFAVAPGEAAYLPVAHDYLDAPDQLDRSEVLKQLKPLLEDGNAAKVGQ
NLKYDRGVLKNYDIELNGIKFDTMLESYCLNSVGGKHDMDSLAARWLNHKTVTFEEIAGK
GKNQLTFNQIAIEQAGHYAAEDADVTLQLHLKMWEKLEPEAGPKQVFEEIEMPLLKVISR
IERNGVLIDQNILAKHSQELTTRVAELELKAHELAGEPFNLSSPKQLQTILFEKQGIKPT
KKTPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPLTGRVHTSY
HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAGSGNRIVAADYSQIELRIMAHLSQ
DKGLLDAFAQGEDIHRATASEVFGVALSKVSGEQRRSAKAINFGLIYGMSAFGLSRQLNI
GAGEAKKYMDLYFERYPGVLRYMEETRAKAAEKGYVETLDGRRLWLPDITSSNAIRRKAA
ERAAINAPMQGTAADIIKRAMIAVDGWLLEQKDDAVRMIMQVHDELVFEIRSDAVDSAIK
TIRDLMENSMKLDVPLQVEVGTGDNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaattgcagaaaatcccctgattctggtcgacggctcatcttatctgtaccgt
gcatatcatgcctttccgccgctaacgaacagtgcaggcgagccaactggcgccatgtat
ggtgtgctcaacatgttgaaaagcctgttgatgcagtatcagccaagccatgtggctgtg
gtcttcgatgcgaaaggcaaaaccttccgcgatgagctttttgaacactacaaatcgcac
cgtccgccgatgccagacgatctgcgtgcgcagattgagccgctgcatgaaatggtgaag
gcgatgggcctgccgctgttggcggtatctggcgttgaggcggatgacgttatcggtacg
ctggcgctagaggcggaaaaactcggccgtccggtgttgatcagcaccggcgataaagat
atggcgcagttagtgacgcctgcgattaccttgatcaacaccatgacgaatatcgtgctc
ggtccggaagaggtcgagcagaaatatggcgtgccgccagcactgattatcgatttcctc
gccatgatgggcgacagctccgataacattccaggcgtgccgggagtcggtgagaaaacc
gcgcaggcgttgctgcaaggcttgggcggtatgcagtcaatctatgacaatctcgataaa
gtggccgatctctcgttccgcggtgcgaaaaccatggcggcgaagctggagcaaaatcgc
gacgtcgcgttcctgtcttatcagctggcaaccatcaaaaccgacgttgagttggatctg
acctgcgatcagcttgtcgtcaatgaacctaatgtcgaagcgctgcaaaccttgtttagc
cgttatgaatttaagcgctggatcaccgatttgcaggatggttcatggctgcaacaaggt
aagaagagcaacgcgcaggctaagaaaccgcagctcagcgaacctgctgcgcccgctgcc
gaagcgaccagcgtgctctctgcggatggctacgtcactatcctcgatgaagcgacattt
gccgcatggcttaaaaagctgaaaagcgccgagctcttcgctttcgatcttgagaccgac
tcgctggatactttaagcgccaatattgtcggcattggttttgccgtcgcgccgggtgaa
gccgcttatctgccggtcgcccacgattatctggatgcgccagatcagctggatcgcagc
gaagtgctgaagcagctaaaaccgctgctggaagatggtaacgcggcgaaggttgggcag
aatctcaaatacgatcgcggcgtgctgaagaattacgacattgaactgaacggcatcaaa
tttgacaccatgctggaatcttattgcctgaatagcgtgggcggaaaacacgatatggac
agtctggccgcgcgctggctaaaccataaaacggtgactttcgaagagatcgcgggtaaa
ggtaaaaatcagctcacttttaatcagattgctatcgaacaagccggccactacgcggcg
gaagatgccgatgtcacgctgcaattgcatctgaaaatgtgggagaaactggagccggaa
gcggggccgaaacaggtatttgaagagatcgaaatgccgttgttgaaggtgatatcgcgg
attgagcgcaacggcgtgctgattgaccagaatatcctggccaaacactcgcaggagctg
accacgcgtgtggccgagctggagctgaaggcgcacgagctggcaggcgaaccgtttaat
ctctcttcacccaaacagctgcaaaccattttgtttgaaaagcagggtattaaaccgacc
aagaaaacgccgggcggcgcgccgtcgaccagcgaagaagtgctggctgaactggctctc
gattatccactgcctaaagtaattctggaacatcgtggtttatcaaagttgaaatcgact
tacaccgataagctgccactgatgatcaatccgcttaccggccgcgtacatacatcctat
catcaggcggtaacggcgacgggacgactctcgtctaccgatcctaacctgcagaatatc
ccggtgcgcaacgaagaagggcgccgaatccgccaggcgtttgtcgccggatcgggcaat
cgtattgtcgccgcggactactcacagattgaactgcgtatcatggcgcatctgtcgcaa
gacaaaggcctgctggatgcgtttgcccagggcgaagatatccaccgtgccaccgcatca
gaagtgtttggtgtggcgttaagcaaagtttcaggtgagcagcgtcgcagtgccaaggcg
atcaactttggtctgatctacggaatgagcgcgtttggtctttcccgccagctcaatatc
ggtgcgggtgaggcgaagaaatacatggatctctactttgaacgctatccgggcgtgctg
cgttatatggaagagacgcgcgcgaaggcagcagagaaaggctatgtagaaacgctcgat
ggtcgtcgtttgtggctgcctgatatcacctccagcaatgcgattcgtcgtaaagcggcg
gagcgagcggcgattaatgccccaatgcaaggcacggcggcagacatcatcaaacgcgcg
atgattgcggtggatggctggctgttggagcaaaaagacgatgccgtgcgcatgattatg
caggtacacgatgaactggtgtttgagatccgcagcgatgcagtggatagcgccattaag
accatccgtgatctgatggagaacagcatgaagctggatgtgccgctgcaggtggaagta
ggcaccggcgataactgggatgaggcacactga
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