Pseudomonas anuradhapurensis: HU763_002500
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Entry
HU763_002500 CDS
T07691
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
panh
Pseudomonas anuradhapurensis
Pathway
panh02025
Biofilm formation - Pseudomonas aeruginosa
panh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU763_002500 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU763_002500 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
panh02044
]
HU763_002500 (tssM)
Secretion system [BR:
panh02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU763_002500 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
DUF4131
AAA_16
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QXI48361
LinkDB
All DBs
Position
545331..548846
Genome browser
AA seq
1171 aa
AA seq
DB search
MKIFFKKVGAFLARTWVWSLLLVLALALLVWFAGPLLAVADNKFWEDAAARLLTISVLFL
VWGLWMVFASWRANQRKQEQLESEGGRERLEREERMDEEGKEIKARFKHALSTLKHSSLY
GGRSERWRRDLPWYLVLGPQGAGKTSLIDHSGLEFPINALERKLARDPSSGDFCDFYFAE
QAVLVDTAGRFLNQADSEVDGHAWRVLLDQLRLRRRNRPLNGVVVTVPLDTLLGGEAAVN
ELAQKVRSRLQELRLRLHVEVPVYLVLSKTDRLQGFDAFFDQQSREENEQVFGITFGKGQ
NGADTELLAKEFQGLLQRLGDQVTQRMHHERNTQRRARILDFPHQLGRIGDQLCLFVDAA
FTGNRYQRASQLRGFYLTSAPHQAPRVDSDNGYHPGTAGRAAPQGRSRFILQLFSRVIFP
EYDLAGLDQRERRRIHWGQRAVYLGALGALALFGVLWAGSFSGNHERLEQVRDLGRQWQR
QHTGLEARDDALAALKPLDSAWQATRVFPASGDVSWLQRGGLYQGAPANEVLQPAYQREL
ETVLLPRVAQMVEGQIRSNLKNRERLLNSLRAYLMLGLPERRDQAWLKDWVAAGWSQRYN
GNTAAQEGLNAHFERLLNQSFSYPLNDTLVAQARQVLRAESLASVVYRVLREQARSLPEY
RLSQQLGPQASQFVGIDYPIPGFYTSQGYQQYFSVQGTNLVNDILRDNWVLGEGRGISDM
DMRRLMVELEQLYFRDYANYWGEAINQVGLIPFSDAGEGADQLSALTAANSPLLLLLTEV
RENTRFPVLAEAADEGNPAVEAAATKKLGKGGAAVAGAVADKARDALARKPLPDTARMAL
QRRFEPLHRLLDDNNGPGPDLAPTLQALNDLQQQLASLARSNQAEEASYQMAKARMAGQR
DALSSLRNGTVRLPRPVAGWFNLLSDDIWRMVLNDTYTYLNQRYQNELYSFYGRAIESRY
PFNAHGTSDVAISDFRDFFKAQGVADRFFDTYMRPFVSGEPGSYRLRSLDGQSLPMTKAF
LDQMSAAQVIRQSFFAQNPDEPQVQFKLEPYTLDPSVSRAEFRFGDSVIDYRHGPIVSTS
LKWPTDAQDGNSSLTLEQLNGRPMALEKNGGPWSLFRLLDLMQAEYLKGRDTMVLKANVG
GMRANYLLTSQRAPNPFDMSVLRGFRLPGEL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttttcaagaaagtgggcgccttcctcgcccggacctgggtctggagcctg
ttgctggtgctcgccctggccctgctggtgtggttcgccgggccgttgctggcggtggcc
gacaacaagttctgggaagacgctgccgcgcggctgctgaccatcagcgtactgttcctg
gtgtggggcctgtggatggtgtttgccagctggcgcgccaaccagcgcaagcaggagcag
ctcgagagcgagggcggtcgcgaacgcctggagcgtgaagagcgcatggacgaggagggc
aaggagatcaaggcccgtttcaagcatgccttgtccaccctcaagcactcgagcctgtac
ggcgggcgcagcgagcgctggcgccgcgacttgccctggtacctggttctcggcccgcag
ggcgcgggcaagaccagcctgatcgaccactcgggcctggaattcccgatcaacgccctg
gagcgcaagcttgcgcgtgatccctccagcggcgacttctgcgatttctatttcgccgaa
caggccgtgctggtggataccgccgggcgtttcctcaaccaggccgacagcgaagtcgac
ggccatgcctggcgcgtgctgctcgaccagttacgcctgcgccggcgtaaccgcccgctc
aacggtgtggtggtcacagtgccgctggacaccctgcttggtggtgaagcggcagtgaac
gagctggcgcagaaggtccgttcacgcctgcaggagctgcgcctgcgcctgcatgtcgag
gtgccggtgtacctggtgctgagcaagaccgaccgcctgcaaggcttcgacgccttcttc
gaccagcagtcgcgtgaagagaacgagcaggtattcggcattaccttcggcaagggccag
aacggcgccgacaccgagctgttggccaaggaattccagggcctgctgcaacgcctgggt
gaccaggtcacccagcgtatgcaccacgagcgcaacactcagcgccgcgcgcggatcctc
gacttcccgcaccagctggggcgtatcggcgatcagctgtgcctgttcgtcgacgccgcc
ttcaccggcaaccgctaccagcgcgccagccagttgcgcggcttctacctcaccagcgcg
ccgcaccaggcgccaagggtcgacagcgacaacggctaccaccccggcacggccggccgc
gccgcgccccaggggcgctcgcggttcatcctgcagctgttcagccgggtgattttcccc
gagtacgacctggccgggctcgaccagcgcgaacgccgccgcatccactggggccagcgg
gctgtctatctcggtgcgctgggtgcactggcgctgttcggcgtgctctgggccggcagc
ttctccggcaaccacgagcgcctggagcaggtgcgcgacctgggccgccagtggcagcgc
cagcacaccggcctggaagcccgcgacgatgcgctggccgcgctcaagcccctggatagc
gcctggcaggccacgcgggtgtttccggccagtggcgatgtctcctggttgcagcgcggt
ggcctgtaccagggcgccccggccaatgaagtactgcagcctgcctatcagcgtgaactg
gaaaccgtcctgctgccacgggtagcgcagatggttgaagggcagatccgcagcaacctg
aagaaccgcgagcgcctgctcaacagcctgcgcgcctacctgatgctgggcctgcccgag
cgccgcgaccaggcctggctcaaggactgggtggcggccggctggtcgcagcgctacaac
ggcaacaccgccgcgcaggaagggttgaacgcgcacttcgagcgcctgctgaaccagtca
ttcagctacccgctcaacgacaccctggtagcccaggcgcgccaggtgctgcgcgccgag
tccctggccagcgtggtctatcgtgtgctgcgcgagcaggcacgcagcttgccggagtac
cgcctgagccagcagctcggaccgcaggccagccagttcgtcggcatcgactacccgatc
cccggcttctacacctcgcagggctaccagcagtacttttccgtgcagggcaccaacctg
gtcaacgatatcctgcgcgacaactgggtgttgggcgagggccgcggcatcagcgacatg
gatatgcgccggctgatggtcgaactggagcagttgtatttccgtgactatgccaattac
tggggcgaggccatcaaccaggtcgggcttattccgttcagcgatgccggtgaaggcgcc
gaccagctatcggcgcttaccgccgccaactcgccgctgctgctgttgctcaccgaggtg
cgcgagaacactcgcttcccggtactggccgaggccgcagacgagggcaacccggccgtc
gaggccgccgctaccaagaaactcggcaagggtggtgcggcggttgctggcgccgtggcc
gacaaggcccgcgacgccctcgccaggaaaccgctgccggacaccgcacgcatggccctg
cagcggcgcttcgaacccctgcaccggctgctcgacgacaacaatggccccggccccgac
ctggcgccgaccctgcaggcgctgaacgacctgcaacagcaactggccagcctggcccgt
tccaaccaggccgaggaagcctcgtaccagatggccaaggcccgcatggccgggcaacgt
gatgccctgagcagcctgcgcaacggcaccgtgcgcctgccgcgtccggtggccggctgg
ttcaacctgctgtccgacgacatctggcgcatggtgctcaacgacacctacacctacctg
aaccagcgctaccagaacgagctgtacagcttctacggccgcgccatcgagtcgcgctac
ccgttcaacgcgcatggcaccagcgacgtggcgatcagcgatttccgcgacttcttcaag
gcccagggggtggcggaccgcttcttcgacacctacatgcgtcctttcgtcagcggtgaa
ccgggcagctaccgcctgcgcagcctggacggccagagcctgccgatgaccaaggcattc
ctcgaccagatgagcgctgcccaggtcatccgccagagcttcttcgcgcagaaccccgac
gagccacaggtgcagttcaagcttgagccgtacacccttgacccatcggtgagccgcgca
gagttccgcttcggcgattcggtgatcgactatcgccatggcccgatcgtttccaccagc
ctgaagtggccgaccgatgcccaggacggtaacagcagcctgaccctggagcagctcaac
ggccgtccgatggcgctggaaaagaatggtgggccatggtcgctgttccgcctgctcgac
ctgatgcaggccgagtatctcaagggccgcgacaccatggtgctcaaggccaatgtcggc
ggcatgcgtgccaactacctgctgaccagccagcgcgcgccgaacccgttcgacatgagc
gtgctgcgcggcttccgcctgccaggggagctgtga
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