Pseudomonas anuradhapurensis: HU763_002940
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Entry
HU763_002940 CDS
T07691
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
panh
Pseudomonas anuradhapurensis
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
panh03000
]
HU763_002940
Transcription factors [BR:
panh03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU763_002940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_23
HTH_17
HTH_30
AAA_2
AAA_5
HTH_29
AbiEi_4
HTH_50
HVO_A0261_N
AAA_16
HTH_28
Mg_chelatase
HTH_7
RWP-RK
HTH_22
IclR_C
Motif
Other DBs
NCBI-ProteinID:
QXI48439
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Position
645546..647399
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AA seq
617 aa
AA seq
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MLAANSRAHVDCVSRVLKNADRLPQAPVPPLILDSWRRSMELYRLDPASQQGPRILSQSL
LNECRERAELFLRIASDAVARLHERVRGADYCVLLTDAQGRTIDYRVESAIRNDCRKAGL
YLGTCWSEGEEGTCGVAAVLTSKAPVTVHKRDHFRAAFIGLTCTAAPVFDPLGELLGVVD
VSALQSPDDRRSQHLIRQLVEQTAREIENAFFMHSAQGHWVMRAHGTPGYVESQPDYLLA
WDADGRLQAINSLARQRLVERLGRLPEHIGELFDIDQLRRVNGASAQRLPGLGGLYGRVS
APQQRQRAQPLRQAQDARIEQHLRLATRVKDCNLAVLVQGETGAGKEVFARQLHQQSLRR
DGPFVTLNCAAIPESLIESELFGYVAGAFTGASSKGMQGLLQQADGGTLFLDEIGDMPVN
LQTRLLRVLAEGEVAPLGAARRERVDIQVICATHRDLAAMVKEGRFREDLYFRLANARFE
LPPLREREDRLGLIHQLLAEEAAACGVEVVLADDALQALLLYRWPGNLRQLRQVLRYACA
VSEGGQVQLQDLPQEVRGDAVACADSVVSCPARQLLLDALIRHRWKPADAARALGISRAT
LYRRVHEHHIEMPRMKG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgcgaactcccgagcccatgtcgattgcgtcagccgggtgctgaagaatgcc
gatcgcctgccgcaggcgccggtgccaccgctgatcctcgattcctggcgccgttccatg
gagctgtaccgtctcgaccccgcttcccagcaggggccgcgtattctctcccagagccta
ctcaacgaatgccgcgaacgggccgagctgttcctgcgcatcgccagcgatgccgttgcg
cgcctgcatgagcgggtgcgcggggccgattattgcgtactgctcaccgacgcccagggg
cgcaccatcgactaccgggtcgagtcggccatccgcaacgactgccgcaaggccgggttg
tacctgggcacttgctggtccgagggtgaggagggcacttgcggggtggccgcggtgctc
accagcaaggcgccggtcacggtgcacaagcgtgaccatttccgcgctgcgtttatcggc
ctcacctgcaccgcggcgccggtgttcgacccgctgggcgagctgctgggcgtggtcgac
gtgtcggccttgcagtcaccggacgaccgccgcagccagcacctgatccgccagctggtc
gagcagaccgcgcgcgagatcgaaaacgccttcttcatgcacagtgcccagggccattgg
gtgatgcgcgcccatggcacgccgggctatgtggaaagccagcccgactacctgctggcc
tgggatgccgatggccgcctgcaggccatcaacagcctggcgcggcagcgcctggtggag
cgcctggggcggttgcccgagcacattggcgagttgttcgacatcgaccagttgcgccgg
gtcaatggcgcatcggcccagcgtttgccaggcctgggcgggctgtatggccgggtcagt
gcaccacagcagcgccagcgcgcgcagcccttgcgccaggcccaggacgcccgcatcgag
cagcacctgcggctggccacgcgggtcaaggactgcaacctggcggtgctggtgcagggc
gagaccggggccggcaaagaggtgttcgcccgccagttgcaccagcagagcctgcgccgt
gacggaccgttcgtcaccctcaactgcgcggccattccggaaagcctgatcgagagcgaa
ctgttcggttatgtcgccggggcgttcaccggggcctccagcaaaggcatgcagggcctg
ttgcagcaggctgacggcggcacgttgttcctcgacgagattggcgacatgccagtcaac
ctgcagacccgcctgttgcgcgtgctggccgaaggcgaagtggcaccgctgggcgctgcg
cggcgggagcgggtggacatccaggtgatctgcgcgacccatcgcgacctggcggcgatg
gtcaaggaggggcgtttccgtgaggacctctacttccgcctggccaatgcccgcttcgag
ttgccaccgttgcgtgagcgcgaggaccggctggggctgattcaccagttgctggccgag
gaagccgcggcctgtggagtcgaggtggtgctggcggatgatgcgctacaggcgctgttg
ctgtaccgctggccgggtaacctgcgccagctgcggcaggtgctgcgttatgcctgtgca
gtgagcgaaggcgggcaggtgcaactgcaggatttgccacaggaggtgcggggcgatgcg
gtcgcctgcgctgacagcgtggtgtcctgtccggcccggcagctgttgctggatgcgctg
atccgccatcgctggaagccggccgatgcggcgcgggctttggggatttcgcgggcgacc
ttgtaccggcgggtgcatgaacatcacatcgagatgccgcgaatgaaaggctaa
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