Pseudomonas anuradhapurensis: HU763_008665
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Entry
HU763_008665 CDS
T07691
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
panh
Pseudomonas anuradhapurensis
Pathway
panh00071
Fatty acid degradation
panh00280
Valine, leucine and isoleucine degradation
panh00310
Lysine degradation
panh00362
Benzoate degradation
panh00380
Tryptophan metabolism
panh00410
beta-Alanine metabolism
panh00640
Propanoate metabolism
panh00650
Butanoate metabolism
panh00907
Pinene, camphor and geraniol degradation
panh00930
Caprolactam degradation
panh01100
Metabolic pathways
panh01110
Biosynthesis of secondary metabolites
panh01120
Microbial metabolism in diverse environments
panh01200
Carbon metabolism
panh01212
Fatty acid metabolism
Module
panh_M00087
beta-Oxidation
panh_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HU763_008665 (fadB)
00650 Butanoate metabolism
HU763_008665 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HU763_008665 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HU763_008665 (fadB)
00310 Lysine degradation
HU763_008665 (fadB)
00380 Tryptophan metabolism
HU763_008665 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HU763_008665 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HU763_008665 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HU763_008665 (fadB)
00930 Caprolactam degradation
HU763_008665 (fadB)
Enzymes [BR:
panh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HU763_008665 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HU763_008665 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HU763_008665 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HU763_008665 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NfeD1b_N
NAD_binding_2
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
QXI49493
LinkDB
All DBs
Position
1865954..1868101
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIQADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSSSAKIGLPEVKLGIYPGFGGTVRLPRLIGPDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPELLMAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLARTSVAESLVGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEAAKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPRVKQAVLAEVEGQVK
DDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADASVLDVLKPIVFEQREVSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgagctc
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgccttaccctgaacgagctt
cgccaggccgtcgatgccatccaggccgacgcctcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaaccgcattttcaacgccttcgaa
gacctcgaagtgccgactgtggccgccatcaacggcatcgccctgggcggtggcctggaa
atgtgcctggccgccgactaccgggtcatgtccagcagcgccaagatcggcctgccggaa
gtcaagctgggtatctacccgggcttcggcggcaccgtgcgcctgccgcgcctgatcggt
ccggacaatgccatcgagtggatcgccgccggtaaggaaaaccgtgccgaagacgcgctg
aaagtcggggccgtggatgccgttgtcgcgcctgaactgctgatggccggtgcgctcgac
ctgatcaagcgcgccatcagtggcgaactggactacaaggccaagcgccagcccaagctg
gaaaagctcaagctcaacgccatcgagcagatgatggccttcgagaccgccaagggcttc
gtcgctggccaggccggcccgaactacccggcaccggtcgaagccatcaagaccatccag
aaggctgccaacttcggccgtgacaaagccctggaagtggaagcggcaggctttgccaaa
ctggccaggacctcggttgccgaaagcctggtcggcctgttcctgaacgaccaggaactc
aagcgcaaggccaaggcccacgacgaaatcgcccacgacgtgaagcaggcggccgtgctc
ggcgccggtatcatgggtggcggcatcgcctaccagtcggcggtcaagggcaccccgatc
ctgatgaaggacatccgcgaagaagccatccagctgggcctgaacgaggctgccaagctg
cttggcaaccgcgtcgagaagggccgcctgaccccggccaagatggccgaggcgctcaac
gccattcgcccgaccctgtcctatggcgatttcgccaatgtcgacatcgtcgtcgaggcg
gtggtcgagaacccgagggtcaagcaggccgtgctggccgaagtcgaaggccaggtgaag
gacgatgcgatcctcgcctcgaacacctcgaccatttccatcaacctgctggccaaggcg
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcatccgtggcgagaagtccagtgacgtggcggtcgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagtgccggtgtcgac
ttcgtgcgtatcgacaaggtcatggaaaagttcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgtgacgtgatggccgaaggcttc
ccggaccgcatgaaggacgagcgtcgctcggccgtcgatgccctgtacgaggccaaccgc
ctgggccagaagaatggcaagggcttctacgcctacgaaaccgacaagcgtggcaagccg
aagaaggtcgccgatgccagcgtgcttgatgtgctcaagccgatcgtcttcgagcagcgt
gaagtcagcgacgaagacatcatcaactggatgatgatcccgctgtgcctggagactgtg
cgctgcctggaggacggtatcgtcgaaaccgctgccgaagccgacatgggcctggtctac
ggcattggcttccctcccttccgcggtggcgcgctgcgctacatcgactcgatcggtgtg
gccgaattcgttgccctggccgatcagtacgccgacctggggccgctgtaccacccgacc
gccaagctgcgtgaaatggccaagaacggccagcgcttcttcaactga
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