Pseudomonas anuradhapurensis: HU763_013890
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Entry
HU763_013890 CDS
T07691
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
panh
Pseudomonas anuradhapurensis
Pathway
panh00300
Lysine biosynthesis
panh00470
D-Amino acid metabolism
panh01100
Metabolic pathways
panh01110
Biosynthesis of secondary metabolites
panh01120
Microbial metabolism in diverse environments
panh01230
Biosynthesis of amino acids
Module
panh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU763_013890 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HU763_013890 (dapF)
Enzymes [BR:
panh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HU763_013890 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
QXI45873
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All DBs
Position
complement(3002092..3002898)
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AA seq
268 aa
AA seq
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MQFVKYHAAGNDYLVYHDDTPFDFSAPAISVICDRHKGLGSDGILVPVIEPGKMLSVRIF
NTDGSEAEKSGNGLRILCRYLWDQGIVTDEAFELATKGGKVHCQVLDHGRRISVAMGMAA
FPETERHAVDVDGMQLQLNPVSMGNPHCVVFVEQPTETLARRFGPIIEHLALFPNRTNVQ
FVNVVDRRNLTVQIWERGVGYTLSSGTSSCAAAAVSHRLGFVDDQVTVHMPGGQITIELD
EAYNVLMQGPVCKIGRYWLDQECLSQIG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgtaaaatatcacgcagctggcaacgactatctcgtctaccacgacgatacc
ccgttcgatttctcggccccggctatctcggtgatatgcgatcggcataaaggactgggc
agtgacggcatcctggtgcctgtcatcgagccaggcaaaatgctctcggtgcgtattttc
aacactgatggctccgaggcggagaagagcggcaacggcctgcgaatcctgtgtcgctac
ctttgggaccagggcatcgttacagacgaagcgttcgaactggcaaccaaaggcggcaag
gttcattgccaggtactcgaccacggaagacgcatttccgtcgccatgggaatggcggca
ttccccgagaccgaacgccacgcagtggacgtcgatggcatgcaactgcaactgaacccc
gtgtcgatgggcaacccccattgcgtagtgttcgtcgagcaacccaccgagacacttgca
cgccgattcgggccaatcattgagcacttggcactttttccaaacagaaccaacgtccaa
ttcgtcaacgttgtggatcgccgaaacctgacggtgcagatctgggagcgtggcgtgggc
tacaccctgtcttcgggcaccagcagttgtgccgctgcggcagtctcacatcggcttggg
ttcgttgatgatcaggtgaccgtgcacatgccgggggggcaaatcaccatcgagctcgat
gaggcctacaacgtcctcatgcagggcccggtgtgcaagattgggcggtattggctggat
caagagtgtctgtcacagatcggctga
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