Pseudomonas anuradhapurensis: HU763_015130
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Entry
HU763_015130 CDS
T07691
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
panh
Pseudomonas anuradhapurensis
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panh03032
]
HU763_015130
03400 DNA repair and recombination proteins [BR:
panh03400
]
HU763_015130
Enzymes [BR:
panh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU763_015130
DNA replication proteins [BR:
panh03032
]
Prokaryotic type
DNA Topoisomerases
HU763_015130
DNA repair and recombination proteins [BR:
panh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU763_015130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXI46107
LinkDB
All DBs
Position
3247503..3248525
Genome browser
AA seq
340 aa
AA seq
DB search
MPDCPLPATLHYVDDSQPGLSRRRWRDRFIYLDAEGQRVRDPDTLARIAALVIPPAYTDV
WICADPQGHLQATGRDARGRKQYRYHAQWREMRDQHKYGRMLAFAHALPKLRKQLEAHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNKSYGLTTLRNRHVQVKGSTIRFQFRGK
RGVEHNVTLNDRRLASLLKRCMELPGQALFQYLDEDGQRHSVGSSEVNQFLQQLTGADFT
AKDYRTWAGSRLALALLRPLAWEPESEARRQVSAIVRQVATRLGNTPAVCRRCYIHPAVL
EHFALGRLANLPKSRVRKGLDREEVALLLFLQALEEQPDH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactgcccgctccccgcaacgctgcattacgtcgatgacagccagcctggcctg
agccgccgacgctggcgggaccgcttcatctacctcgacgccgaaggccagcgggtacgt
gacccggacaccctggcacgtatcgccgcactggtgatccccccggcctacaccgacgtg
tggatatgcgccgacccgcagggccacctgcaagcgacggggcgcgatgcccgtggtcgc
aagcaataccgctaccacgcccaatggcgggaaatgcgcgatcaacacaagtacgggcgc
atgctggctttcgcccacgcgttgccgaagctgcgcaaacaactggaggcgcaccttgcc
cgcccaggcctggatcgggaaaaggtcatggccctggtggtcagcctgctcgaccacacg
ctgatccgcatcggtaaccaacgctacctgcgtgacaacaagtcctacggactcaccacc
ctgcgcaaccgccacgtgcaagtcaaaggcagcaccattcgcttccagttccgtggcaag
cgtggcgtcgaacacaacgtcaccctcaacgaccggcgcctggccagcctgctcaagcgc
tgcatggaactgcccggccaggcgctgttccagtacctggatgaagacggccaacgccat
agcgtcggctccagcgaggtgaaccagtttctgcaacagttgaccggtgccgattttacc
gccaaggactaccgcacctgggccggcagccgcctggccctggccctgctgcggccgctg
gcctgggagcccgagagcgaagcccggcgccaggtcagcgccatcgtccgccaggtggcc
acgcgcctgggcaatacaccggccgtgtgcaggcgctgttatatccacccggcagtactg
gaacactttgccttggggcgtctggccaacttgccgaaaagccgcgtgcgcaaaggcctg
gaccgtgaagaagtggctttgttgctatttcttcaggcacttgaggaacagccggaccat
taa
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integrated database retrieval system
