Pseudomonas anuradhapurensis: HU763_017615
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Entry
HU763_017615 CDS
T07691
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
panh
Pseudomonas anuradhapurensis
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
panh03009
]
HU763_017615
Enzymes [BR:
panh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HU763_017615
Ribosome biogenesis [BR:
panh03009
]
Prokaryotic type
rRNA helicases
HU763_017615
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
ERCC3_RAD25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QXI46579
LinkDB
All DBs
Position
complement(3824019..3825380)
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AA seq
453 aa
AA seq
DB search
MQLNFPHLPEVTSVFSQFALHERLLKAVAELNFVEPTPVQAAAIPLALQGRDLRVTAQTG
SGKTAAFVLPLLNRLVDLRERRVEIRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTG
GEDFKEQAAMLRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDME
RLCKECENRQQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHE
QHKEQIVQWLLANETFDKAIIFTNTRALADRIYGHLVAKDVKAFVLHGEKDQKDRKLALD
RFKQGSSKVLVATDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLI
THNDWNLMSSIERYLKQQFERRVIKEVKGTYNGPKKVKASGKAAGSKKKKVEKKSGDKKA
AAKRKPTAKPKANAPLASSDGLAPLKKRKAAAE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaatttcccgcacttgcctgaggttacctccgtgttctcccaattcgccctg
cacgaacgcctgcttaaagccgtggccgagcttaactttgtcgagccaaccccggtgcag
gccgcggccatccccctggccctgcaagggcgtgacctgcgcgtgaccgcacagaccggc
agcggcaagaccgcagccttcgtgctgccactgctcaaccgcctggtcgacctgcgcgag
cgccgtgtggagatccgcgcgctgatcctgctgccgacccgtgaactggcccagcaaacc
ctcaagcaggtgcagctgttctcgcagttcacctacatcaaggcgggcctggtcaccggt
ggcgaggacttcaaggaacaggccgccatgctgcgcaaggtgccggacgtgctgatcggc
accccgggccgcctgctggagcagctgaatgccggcaaccttgacctgtcccatgtgcag
gtgttgatcctcgacgaagccgaccgcatgctcgacatgggcttcgccgaagacatggag
cgcctgtgcaaggagtgcgagaaccgccagcagaccctgctgttctcggccaccaccggc
ggcgctgcgctgcgcgacatcatcggcaaggtgctgaaagacccggagcacctgatgctc
aacagcgtctcgcagctggccgaaggcacccgccagcagatcatcaccgccgaccacgaa
cagcacaaagagcagatcgtgcagtggctgctggccaacgagacgttcgacaaggcgatc
atcttcaccaacacccgcgccctggccgatcgcatctacggccacctggtggccaaggac
gtgaaggccttcgtgctgcacggcgaaaaggaccagaaggaccgcaagctggccctggac
cgcttcaagcagggcagttccaaggtgctggtggccaccgacgtggctgcccgtggcctg
gacatcgacggcctggacctggtgatcaacttcgacatgccgcgcagcggtgacgagtat
gtgcaccgcgtgggccgtactggccgtgccggtggcgaaggcctggcaatctcgctgatc
acccacaacgactggaacctgatgtcgagcatcgagcgctacctcaagcagcagttcgag
cgccgggtgatcaaggaagtgaagggcacctacaacgggccgaagaaggtcaaggcctcg
ggcaaggcggccggtagcaagaagaaaaaggtcgagaagaagtcgggtgacaagaaagcc
gcggccaagcgcaagccaaccgccaagccgaaggccaatgcaccgctggccagctccgat
ggcttggcaccgttgaagaagcgcaaggcggcggcggagtaa
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