Pseudomonas anuradhapurensis: HU763_018560
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Entry
HU763_018560 CDS
T07691
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
panh
Pseudomonas anuradhapurensis
Pathway
panh02025
Biofilm formation - Pseudomonas aeruginosa
panh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU763_018560 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU763_018560 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
panh02044
]
HU763_018560 (tssM)
Secretion system [BR:
panh02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU763_018560 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
DUF4381
nSTAND_NTPase5
VirB8
Motif
Other DBs
NCBI-ProteinID:
QXI46751
LinkDB
All DBs
Position
complement(4044925..4048434)
Genome browser
AA seq
1169 aa
AA seq
DB search
MKAFFSFVIRWVIPLLGLIALSLIIWFVGPLLEMLAPPTPRWLLIILLFALWGGYRAWRI
VQARRQAAKVMQSLAAETAPDPASVATSEELAALRQRMDEALALLKKARLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGEGAIRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSHAQVDKAAWLGFLDLLKTQRSRRPIDGAFIAISLSDLLLGSDAERAAHAAAIR
ARIQELYSQLGVRFPVYLMLTKLDLVPGFMEFFDNLGKDERAQVWGMTFPLDTLEQGGDG
PLAQFDNEFGLLEQRLGERLVERLQQERDPARRDLIYGFVQQFAALRGNLKLFLDGIFKP
NAFEARALLRGVYFTSGTQEGSPIDRLIGSMAQSMGLDRAHLARQSGSGRSYFIERLFTA
VAFAERGLVGSNPKVEQRRRWIARGALALSVALVLLVGTLWTLSYRANQQYIAEVDSRLQ
PLGKSVQGLSPAQRNVVDVLPLLNAVRHLADDPPSWAEGLGLYQGDMLESESQSLYRKLL
IAIFAPRLVTRIEEQLYAGGPSDYLYEGLKAYLMLADAEHYDPDFIKAWITLDWERQLPR
DLAPDLRQALEQHLAALFEKRPPNARLDQRLIDDTRRQLQQLPVAQRVYDRVKRQKLPSG
VDDFRVSDAAGRDAALVFRFKSGKPLSEPLPGLFTVQGYRQAFLSASLAQSTTLAEERWV
LGRAPGEAGDARRLADDVQQLYYQDYIRHWDALLDDLDFVPITSVGQAADVLRVLSGPTS
PMKQLLQAVARETNLAQPTTLDKVQDKAEQAGVDQLRQRLGGLLGDAPLPVDSPAARPQD
PVTTHFAELATLVGSGEGQPAAIDGLLTDLNALYVQVSAMVGASGDALLGEAKNQAQAAA
QRVALGAARQPKVVQNLVSSVLGSTHGIVMGGVRNQLNAAWASEVLNVYRQSLSGRYPMV
AGSARDATLEDFGQFFGVGGVMDNYFRKYLQPYVNTSSTPWSWQPGAAQKLGIGSNVLYT
FQRAATIRDAFFRSGNGLQPSVRFELKPVAMDASITQFLLDLDGQQVSYDHGPSRPVALQ
WPNPNSIGVVRLSIAPPAASGRSGLTVEGPWAWFRLLDQSDLVAGSSPERFNLRLRVDGA
SVSYELRASSAFNPFRSRVVSGFSLPEHL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagttttgtcattcgctgggtaatcccgctgctgggcctgatcgcc
ctcagcctgatcatctggttcgtcgggccgttgctggaaatgctggcgccgccgacgcca
cgctggttgctgatcatcctgctgttcgccctgtggggcggctaccgcgcctggcgcatc
gtgcaggcacgccgacaggcggccaaggtcatgcagagcctggccgcagagaccgccccg
gaccctgccagcgtggccaccagcgaagagctggcggcgctgcgccagcgcatggacgaa
gccctggccctgctgaagaaagcccgcctgggcggtgacgaacggcgcaacctgtacgag
ctgccgtggtacgtgataatcggcccgcccggctcgggcaagaccaccgcgctggtcaat
tcgggcctgcacttcccgctggccgcgcaactgggcgagggtgccatccgtggtgtcggc
ggcacgcgcaactgcgactggtggttcaccgaccaggccgtgctgctcgacaccgccgga
cgctacaccacccaggatagccacgcccaggtcgacaaggcggcctggctgggctttctc
gacctgctcaagacccagcgctcgcgccgcccgatcgacggcgcgttcatcgccatcagc
ttgtccgacctgctgctgggcagcgatgccgagcgcgccgcgcatgccgcggcgatccgt
gcgcgcatccaggaactgtacagccagctgggtgtgcgcttccccgtgtacctgatgctg
accaagctcgacctggtgccgggcttcatggagttcttcgacaacctgggcaaggacgag
cgtgcccaggtgtggggcatgacgttcccgctggataccctcgaacagggcggtgacggc
ccgttggcacagttcgacaacgagttcgggttgctcgaacagcgcctcggcgagcgcctg
gtcgagcgcctgcaacaggaacgcgacccggcccggcgcgacctgatctacggcttcgtg
cagcagttcgccgccctgcgtggcaacctcaagctgttcctcgacggcatcttcaagccc
aacgccttcgaggcgcgggcgttgctgcgcggtgtgtacttcaccagcggcacccaggaa
ggcagcccgatcgaccggctgatcggcagcatggcccagagcatgggcctggaccgtgcg
cacctggcacgccagagcggtagcgggcgcagctatttcatcgagcggctgttcaccgcg
gtggccttcgccgagcgcggcctggttggcagcaaccccaaggtggagcagcggcgccgc
tggatcgcccggggcgcgctggccctgagcgtggccctggtgctgttggtcggcaccttg
tggaccctcagttaccgcgccaaccagcaatacatcgccgaggtcgacagccgcctgcag
ccgctgggcaaaagcgtgcaaggcctgagccccgcgcagcgcaacgtggtcgacgtgctg
ccgctgctcaacgccgtgcgccacctggccgacgacccacccagctgggccgagggcctg
ggcctgtaccagggcgacatgctcgaaagcgaatcgcagagcctgtaccgcaagctgctg
atcgccatcttcgccccgcgcctggtcacccgcatcgaggagcagctgtatgccggcggg
ccctccgattacctttacgaaggcctcaaggcctacctgatgctggccgatgccgagcac
tacgacccggacttcatcaaggcctggatcaccctcgactgggagcgccagttgcctcgc
gacctggcgcctgacctgcgtcaggccctggagcagcacctggcggcgctgttcgagaaa
cgcccgccgaatgcacgcctggaccagcgcctgatcgacgatacccgtcgccagttgcag
caactgccggtagcccagcgggtgtacgaccgggtcaagcgccagaagctgcccagcggg
gtcgacgacttccgcgtcagcgacgctgccgggcgcgatgccgccctggtatttcgtttc
aagagcggcaagccgctgagcgagccgctgccggggctgttcaccgtgcagggctatcgc
caggcattcctctccgccagcctggcgcagagcaccaccctggccgaggaacgctgggta
ctgggccgcgcgccgggcgaggcgggcgatgccaggcgcctggccgacgatgtgcagcag
ctctactaccaggattacatccgtcattgggatgccctgctcgacgacctggacttcgtg
ccgatcaccagtgtcggccaggccgctgacgtgttgcgcgtgttgtccgggccgacctcg
ccgatgaagcagttgctgcaggcggtggcgcgtgaaaccaacctggcgcagccaaccact
ctcgacaaggtccaggacaaggctgagcaggccggcgtcgaccagctgcgccagcgcctt
ggcgggttgctcggtgacgcgccgctgcccgtcgacagccccgctgcacgcccgcaggac
ccggtgaccacgcacttcgccgagctggccacgctggtcggcagcggcgaaggccagccc
gccgccatcgacggcttgctcaccgacctcaatgcgctctacgtgcaggttagcgccatg
gtcggggccagtggcgacgccttgctcggcgaggccaagaaccaggcccaggccgcggcg
caacgggtggccctgggcgcggcacgccagcccaaggtggtacagaacctggtcagctcg
gtacttggctcgacccacggtatcgtcatgggcggggtgcgcaaccagctcaatgccgcc
tgggccagcgaagtgctgaatgtctaccgccagtcgctcagtggccgctacccgatggtg
gccggcagtgcgcgtgacgccacgctggaagacttcggccagttcttcggcgtcggcggg
gtgatggacaactacttccgcaagtacctgcaaccctacgtcaatacctccagcacaccg
tggagctggcagccgggcgcggcgcagaagctgggcatcggcagcaacgtgctgtacacc
ttccagcgcgcggcgaccatccgcgatgccttcttccgcagcggcaacggcctgcagcca
agcgtgcggttcgaactcaagccggtggcgatggacgcgagcatcacccagttcctgctc
gacctcgacggccagcaagtcagttacgaccacggcccgagccgcccggtggcgctgcag
tggcccaaccccaacagcatcggcgtggtccgcctgtcgatcgcgccgcccgcggccagc
ggccgttcggggctgacggtggaaggcccatgggcgtggttccgcctgctcgaccagtcc
gacctggtggccggcagctcgccagagcgcttcaacctgcgcttgcgcgtggatggcgcc
agcgtgtcctacgagctgcgcgccagcagtgccttcaacccgttccgcagccgagtggtc
agcggtttcagcctgccggagcatctgtga
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integrated database retrieval system
