Pseudomonas anuradhapurensis: HU763_018570
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Entry
HU763_018570 CDS
T07691
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
panh
Pseudomonas anuradhapurensis
Pathway
panh02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU763_018570 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
panh02044
]
HU763_018570 (tssK)
Secretion system [BR:
panh02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU763_018570 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QXI46753
LinkDB
All DBs
Position
complement(4049745..4051079)
Genome browser
AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFITTQHFQQHDRYLEHLVDTRSRPLNVAAWGFSELLLDQGLLAQGKV
AILSARGLLPDGTPFDIPRDDLPPAPLEVPDELRDGVLYLGLPLKRAGARDTVDEGEAVA
GARYISRVSEVRDDNAPFENRAPLALGSRALRLLRSEDGLSDYAALGMLRIREKRADRAL
VVDDSYIPPVLDVAASQQLSGFCGELLGLLHQRGEALAGRVVASANGGASEIADFMLLQL
VNRAQPLVEHLNQLSPLHPERLYSELVALAGEFATFTRDGRRPHSFPVYQHDDLAATFAP
VMAALREALSTLIDSKAVAIPIVEKAYGIHVGMLADRSLLDSASFILVVRADVPSETLRS
RFGQQSKIGSVEHIRDLVNLQLPGIGLLPLPVAPRQIPFHAGSTYFELDRGSEHWKQLQH
SGGFAFYVAGEFPGLSLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcatcacgacccagcacttc
caacagcatgatcgctacctcgaacacttggtcgatacccgcagccgcccgttgaacgta
gccgcctggggcttttccgagctgctgctcgaccagggcctgctggcccagggcaaggtg
gcgattctcagcgcccgcggtttgctgcccgacggcacgccgttcgacatcccccgtgac
gacctgccgccggcaccgctggaagtgcccgacgagctgcgcgacggcgtgctttacctg
gggctgccgctcaagcgggccggggcccgcgacaccgtcgacgaaggcgaggccgtggct
ggcgcccgctacatcagccgggtcagcgaagtgcgtgacgacaacgcgccgttcgagaac
cgtgccccgctggcgctcggcagccgcgccctgcgcctgttgcgcagcgaggacggcctg
agcgactacgccgccctcggcatgctgcgcatccgcgagaaacgcgccgaccgcgcgctg
gtggtggatgacagctacatcccgccggtactcgacgtggcggccagccagcagctgtcc
ggtttctgcggcgagttgctgggcctgttgcaccagcgtggcgaagcactggctggcagg
gtggttgcctcggccaatggcggcgcgtcggagattgccgacttcatgctgctgcaactg
gtcaaccgcgcccagccgctggtcgagcacctcaaccagctgagcccgttgcaccccgag
cggctgtacagcgagctggtggcgctggccggcgagttcgccaccttcacccgcgatggc
cggcgcccgcacagctttccggtctatcagcacgacgacctggcggcgaccttcgcgccg
gtgatggccgccttgcgcgaagccttgtcgaccctgatcgacagcaaggcggtggctatt
cccatcgtcgagaaggcctacggcatccacgtcggcatgctcgccgaccgcagcctgctc
gatagcgccagcttcatcctggtggtgcgcgccgacgtccccagcgagaccctgcgcagc
cgcttcggccaacagagcaagatcggttcggtggagcacatccgcgacctggtcaacctg
cagctgccgggcatcggcctgctgccgttgccggtggcgccacggcagattccgttccat
gccggttccacctacttcgagctcgaccggggcagcgagcactggaagcagttgcagcac
tcgggtggctttgccttttacgtcgccggtgagttccccggcctgagcctggccttctgg
gccattcgaggataa
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