Pseudomonas anuradhapurensis: HU763_019195 Help Entry HU763_019195      CDS       T07691                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism panh  Pseudomonas anuradhapurensis Brite KEGG Orthology (KO) [BR:panh00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:panh03400]     HU763_019195 Enzymes [BR:panh01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      HU763_019195     5.6.2.6  RNA 3'-5' helicase      HU763_019195 DNA repair and recombination proteins [BR:panh03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     HU763_019195 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD WH4_Lhr WH_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 MarR_2 DprA_WH AAA_25 GntR HTH_IclR Motif Other DBs NCBI-ProteinID:  QXI46869 LinkDB All DBs Position 4187756..4192030 Genome browser AA seq 1424 aa AA seqDB search MNLPAKHHPVLELFHPAVRTWFRRCFTTVTDAQARAWPLIQAGQSLLLAAPTGSGKTLSA FLAVLDELFRQGLEQQGELPAQTQVVYVSPLKALSNDIRLNLQAPLEGISQALAEQGLGA PRITTAVRTGDTPQKERAAMRKLAPHILVTTPESLYVLMGSASGREGLASVHTVIVDEIH ALASNKRGAHLALTLERLQALCKQPLRRIGLSATQRPVERVAQFLVGTGRPCAIVDVGHA RQRDLAIEVPPVPLGAVMATDVWGLVYDRLAELAREHRTTLVFVNTRRLAERITRHLSDR LGKEAVAAHHGSLAKELRLDAEQRLKNGQLQVLVATASLELGIDIGDIDLVCQIASPGSI AAFLQRVGRAGHQVDGVPKGRLFPTSRDDLIECVALLDCVRRGELDELHIPRAPLDVLAQ QIVAEASNQAWHELALYDCLRQATPYAELDLQHYQALLRMLAEGYNGRHGVRSAYLHRDA VSGTLRGRRGSQLTALTSGGTIPDNADYAVLLEPQALNIGSVNEDFAVESIAGDIFQLGN ASYRILRVEPGRVRVEDAHGLPPTIPFWLGEAPGRSDELSAAVARLQAQIDQHLAQAGGN LAEVLAWLQETFELGQDSASQLLDYLARTREVLGALPSQETLVMERFFDESGGTQLIIHS PYGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFELDEVWRYLNSRSAE PILVQALLDAPLFGVRWRWNASVAMALPRFIGGRKVAPQVQRIKSEDLVAAVFPEQIACL ENIVGERQIPDHPLVEQTLDDCLHEAMDSEGWLALLRRMESGTVRLLCRDLPAPSPLASA ILNARPYAFLDDAPLEERRTQAVLNRRWNEVHSGDDLGALDADAIAAVAAEAWPEPGNAD EMHEALMGLGAISQTEVKGNASWDMLLRQLADAGRAICLVDEGLWLARERLSLLQVLYPG TRLHPALPVLPGFDQACEPDTALVELLRARLSGHGPLTQAQIAAPLGKPLAAIEQALVRL EAEGYVLRGHFSPGARELQWCERHLLARIHRYTVKRLRREIEPVSLQDFMRFLFDWQHLA AEQRLRGPQAVAEVLGQLQGFPSAAGAWEAELLPARIQDYSPHWLDDACRSGQFAWSRLA TTVSSSTLSSTPLVLLPREYLNVWRSLAPVPALDSLGPRAQRVHEVLQAQGALFFDELAH DAHLLPSELETALQELVGAGLVGADSFAGLRSLITPAAKRISRNSRRGHPPLLSSMAHAG RWALLRRGAVDDSQRLEHIARALLRRYGVVCWRLLERESDVLPPWRELLRCYHRLEARGE IRGGRFIAGLAGEQFALPEAVGLLRQVRRRERDGALVAVSASDPLNLIGSLLPGAKVPAV TGNRLLYRDGVPVAVRVAGRYSFLVEAPAQEQQGWRQILLRDKL NT seq 4275 nt NT seq  +upstreamnt  +downstreamnt atgaacctgcccgccaaacaccacccggtgctcgaactgttccaccctgccgtgcgcacc tggttccgtcgctgtttcaccacggtcaccgacgctcaggcccgtgcctggccgctgatc caagctggccagtcgctgctgctggcggcaccgaccggctcgggcaagaccctcagcgcc tttctggccgtgctcgacgaactgttccgccaaggcctggagcagcagggcgagctgcct gcacaaacccaggtggtctatgtttcgccgctcaaggcgctgtccaacgatatccgcctg aacttgcaggccccgctagaaggcatcagccaggccctggccgaacagggccttggcgcg ccgcgcatcaccacggccgtgcgcaccggcgacacaccacaaaaggaacgcgccgccatg cgcaagctggcaccgcacatcctggtaaccacacccgaatcgctctatgtgctgatgggt tcggcttcgggccgtgaaggtctggccagtgtgcacacggtgatcgtcgatgaaatccat gccctggccagcaacaagcgcggtgctcacctggcattgaccctggaacgcctgcaggcc ctgtgcaagcagccactgcggcgtatcggcctgtcggccacacagcgcccggtcgagcgg gtggcacaattcctggtcggcaccgggcgcccctgcgcgatcgtcgatgtcggccatgca cggcagcgcgacctggccatcgaagtgcctccggttccgcttggcgcagtgatggccacc gatgtctggggcctggtctacgaccgcctggccgagttggcaagggagcaccgtaccacc ctggtgttcgtcaatacccggcgcctggccgagcgcatcactcgccacctcagtgatcgg ctgggcaaggaggcagtggccgcgcaccatggcagcctggccaaggaactgcgcctggac gccgaacaacgcctgaaaaacggccagttgcaggtacttgtggccaccgcgtcgctggaa ctgggcatcgacatcggtgacatcgacctggtctgccagattgcctcgccaggttctatc gcggccttcctgcagcgggtcggccgcgccggccaccaggtcgatggcgtgcccaagggg cgcctgttcccgacctcgcgcgacgacctgatcgaatgcgtagccctgctcgactgcgtc cgccgcggcgagctggatgaactgcacattccccgggcgccactggacgtactggcccag cagatcgttgccgaggccagcaaccaggcttggcacgaactggccctgtacgactgcctg cgccaagccacgccctatgccgaactcgacctgcaacactaccaggccctgttgcgcatg ctcgccgaaggctacaacggccgccacggcgtacgtagtgcctacctgcaccgcgacgcg gtcagcggcaccctgcgtggccgccggggtagccagctgaccgcgctgaccagtggcggc acgatccccgacaacgccgactacgccgtgttgctcgagccacaggcgctgaacatcggc agcgtcaacgaagactttgccgtggagagcatcgccggcgatatcttccagctgggtaat gcctcctatcgcatcctgcgcgtggaaccgggccgggtgcgggtggaagatgcacatggc ctgccgccgaccattccgttctggttgggcgaggcaccagggcgcagcgacgaactatct gccgcagtggcgcggctacaggcgcagatcgatcagcacctggcgcaggccggcggcaat ctggccgaggtgctggcgtggttgcaggaaactttcgaactgggccaggacagcgccagc cagttgctggactacctggcccgcacccgtgaagtgctcggcgccctgccctcgcaggaa accttggtgatggagcgcttcttcgatgagtccggcggcacccagctgatcatccattcc ccctacggcagccgcatcaaccgcgcctggggcctggccctgcgcaagcgcttctgccgt accttcaatttcgagttgcaggcagcggccagcgaggacgccatcgtgctgtcgctgtcc accagccacagtttcgaattggacgaggtgtggcgttacctgaacagccgcagcgccgag ccgatcctcgtccaggctttgctcgatgcgccgttgttcggcgtgcgctggcgctggaac gccagcgtggccatggccttgccgcgcttcatcggcgggcgcaaggtggcgccacaggtc cagcggattaaaagcgaagacctggtggcggccgtgttccccgagcagatcgcctgcctg gaaaatatcgtcggcgagcggcagattcccgatcacccactggtcgagcaaaccttggac gactgcctgcacgaagcgatggacagcgaaggctggctggcgctgctgcggcgtatggaa agcggtacggtacgcctgctgtgccgcgacctgccggccccttcgccattggcttcggcc atcctcaatgcccgcccgtatgccttcctggatgacgcgccactggaggaacggcgcacc caggctgtgctcaaccgacgctggaacgaagtgcacagcggcgacgacctgggcgcgctg gatgccgatgccattgccgctgtcgctgctgaagcctggccagagccaggcaatgccgac gaaatgcatgaagcattgatgggactgggggccatcagccagacggaagtaaagggcaat gccagctgggacatgctgctgcgccagttggccgatgccgggcgggcaatatgcctggtg gatgaaggactgtggctggcgcgtgaacgcttgagcctgttacaggtgctgtatcccggc acccgtctgcaccctgcgctgccggtcctgccaggcttcgaccaggcctgcgagccggat actgcactggtcgagctgctgcgcgcccgactcagtggccatggcccgctgacccaggca cagatagccgcaccgctgggcaagccgctagcggcgatcgaacaggctctggtacgcctg gaagccgaaggttatgtactgcgcgggcatttcagcccaggagcacgcgaactgcagtgg tgcgagcgccacttgctggcgcgcatccaccgctacacggtcaaacgcctgcgccgggaa atcgagccggtcagcctgcaggacttcatgcgcttcctgttcgactggcagcacctggcc gctgagcaacgcctgcgcgggccgcaagccgtggccgaggtactgggccagttacaaggc tttccgagtgctgccggcgcctgggaggccgaactgctgccggcacgcatccaggactac agcccgcactggctcgacgatgcctgtcgcagcgggcagttcgcctggagccgcctggcc accacggtgtcgagcagtaccttgtccagcaccccgctggtgctgctaccgcgcgagtac ctgaatgtgtggcgcagccttgccccggtgcccgcgctcgacagccttggcccgcgggcg cagcgcgtacacgaggtgctgcaggcacagggcgcgctgttcttcgacgaactggcccac gacgcccacctgctgcccagcgaactggaaacggccttgcaagagctggtaggcgccggc ctcgtgggggccgacagtttcgccggcctgcgcagcctgatcaccccggcggcgaaacgt atctcccgcaacagccgccgtggccacccgccgctgctcagcagcatggcccatgccggg cgctgggccttgttgcgccggggggcggtggacgacagccagcgcctggaacacatcgcc cgggccctgctgagacgctatggcgtggtgtgctggcggctgcttgagcgcgaaagtgac gtgctgccgccgtggcgcgaactgctgcgctgctaccaccggctggaggcgcgcggcgag attcgtggcgggcgcttcattgccgggctggcgggtgaacaattcgccttgccggaagcg gtgggcctgctgcgacaggtacggcggcgtgagcgagacggggcgctggtggcagtgagt gccagtgacccattgaacctgatcgggtcgttgttgccgggagcgaaggtaccggcggtc actggcaaccgcctgttgtatcgcgatggggtgccggtggcggtgcgggtggccggacgc tattcgttcctggtcgaggcgccggcccaggaacagcaaggctggcggcagatattgctg cgagacaagttgtga

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