Pseudomonas anuradhapurensis: HU763_020275
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Entry
HU763_020275 CDS
T07691
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
panh
Pseudomonas anuradhapurensis
Pathway
panh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU763_020275 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panh03019
]
HU763_020275 (rhlB)
Enzymes [BR:
panh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HU763_020275 (rhlB)
Messenger RNA biogenesis [BR:
panh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HU763_020275 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QXI47072
LinkDB
All DBs
Position
4423174..4424631
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AA seq
485 aa
AA seq
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MLKALKKIFGKGDAAPQAVAPAASVTAPAPATDARPAAKPTAPRATPAPKAEQPAVVAPA
ADKPAKDKPRRERKPKPQASLWKPEDFVVEPQEGKTRFHDFKLSNELMHAIHDLGFPYCT
PIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPT
RELVVQIAKDAIALTKYTGLNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQRG
EVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQW
TTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQNKWERVMVFANRKDEVRRI
EEKLVRDGINAAQLSGDVPQHKRIRTLESFREGHITVLVATDVAGRGIHIDGISHVINFT
LPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQLPAIEELLGRKIKCEMPADELLKPV
PRKHH
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaggcactcaagaaaatattcggcaagggagacgccgcgccacaggccgtcgct
cctgctgccagcgtgacggcgcctgcgcccgccaccgacgcccggccagcggcaaaaccg
accgccccgcgcgccacccctgcacccaaggctgaacaacctgctgtggttgcaccggcc
gccgacaagccggccaaggacaaaccgcgccgtgagcgcaagcccaagccgcaggccagc
ctgtggaaaccggaagacttcgtggtcgaaccacaggaaggcaagacccgcttccacgac
ttcaagctgtccaacgagctgatgcacgccatccatgacctgggcttcccctactgcacg
ccgatccaggcgcaggtgctgggttacaccctgcgtggccaggacgccatcggccgggcc
cagaccggtaccggcaagactgcagcgttcctgatctcgatcatttcccagttgcagcag
acaccgccgcccaaggaacgctacatgggcgagccgcgcgcgctgatcatcgcccctacc
cgcgaactggtggtgcagatcgccaaggacgccatcgccctgaccaagtacaccggcctc
aacgtcatgagcttcgtcggcggcatggacttcgacaaacagctcaaggccctggaagcg
cgccattgcgacatcctggtcgccacccccggccgtctgctggacttcaaccagcgtggc
gaggtgcacctggacatggtcgaggtgatggtcctggacgaagccgaccgcatgctcgac
atgggcttcatcccccaggtccggcagatcattcgccagaccccaccgaaaagcgagcgc
cagaccttgctgttctccgccaccttcaccgacgacgtgatgaacctggccaagcagtgg
accaccaacccggccatcgtcgagatcgagccggagaacgtggccagcgaaacggtggaa
cagcacgtgtatgccgttgccggcagcgacaaatataaactgctgtacaacctggtgacc
cagaacaagtgggaacgggtgatggtattcgccaaccgcaaggacgaagtgcggcgcatc
gaggaaaaactggtgcgcgacggcatcaatgccgcccagttgtcgggcgacgtgccacag
cacaagcgtatccgcaccctggagagcttccgcgaagggcacatcaccgtgctggtggct
accgacgtggccgggcgcggcatccacatcgacggcatcagccacgtgatcaacttcacc
ttgccggaagacccggacgactacgtgcaccgcataggccgtaccgggcgtgccggtacc
agcggggtgtcgatcagctttgccggtgaggatgattcctaccagttgccggcgatcgaa
gagctgctggggcgcaagatcaagtgcgaaatgccagcggatgagctgttgaaaccggtg
ccgcgcaagcaccactga
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