Pseudomonas anuradhapurensis: HU763_020850
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Entry
HU763_020850 CDS
T07691
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
panh
Pseudomonas anuradhapurensis
Pathway
panh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HU763_020850 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panh03400
]
HU763_020850 (recB)
Enzymes [BR:
panh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HU763_020850 (recB)
DNA repair and recombination proteins [BR:
panh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU763_020850 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QXI47183
LinkDB
All DBs
Position
complement(4542792..4546469)
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AA seq
1225 aa
AA seq
DB search
MTQDRPLALSFPLHGSQLIEASAGTGKTFTISALYLRLILGHGGEQGFDRELLPPQILVV
TFTDAATKELRERIRARLAEAARFFRGELQAADPLLHQLRGDYPEEAWPRCAGRLEIAVQ
WMDEAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHSDLLAQVVRDYWRRFCYGMQGDA
LAWVRNHWGSPDALLPRIRPLFGRVRAQQEGLEPAALIQASLQQRGEQLARLKAPWAQWA
EELRQICHAAVAAKQVDGRKMRAQYFDSWCDKLCAWAADEQLVELELGSGFSRLTPAGML
DAWKSGEPPVHPALDAMQALQQQLQALDSPEAPLLEHAASWVSARFEVEKRRRAEMGFDD
MLLRLQHALASEAGERLAGLIREQFPVALIDEFQDTDPVQYGIFERIYRISENRAQTGLF
MIGDPKQAIYAFRGADIYTYLAARRATSGRLHSLDTNYRSSKAMVAAVNQLFLQAEAREA
GRGAFLFREADDNPLPFIEVRAKGRDEQLLIDGEPCAALQCWQLESEEPVSGSVYRQQLA
ASCASHIVALLNGGQQGSAGFRTAEGELRPCLPSDIAILVRDGHEAQMVRAELAAREVRS
VYLSDKDSVFAAQEAHDLLAWLKACAEPDSERLLKAALASLTLNLSLAALDRLNQDERVW
EDWVMRFRRYRDIWQRQGVLPMLRHLLHDFQLPRTLIRRSDGERVLTNLLHLAELLQQAA
GELDGEQALIRHLAEHLASSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVYLPFIC
TSKPVDGSRLPLAWHDSLGNAHLTLTPDPEQIARADDERLAEDLRLLYVALTRAQHACWL
GVADLKRGNQRSSQLHRSAFGYLLGGGLALPSSEQLGSWLQALAATSPHISCPGLPQADQ
QLYRMPHAARELLPARKPRRAAAEHWWIASYSALRIGEQALGADSSQAQQLFDDERADAQ
MLREVPADSGDIHRFPRGPNPGTFLHGLLEWAGREGFSQVSGNPQLIQETVGQRCNRRDW
TGWITTLSQWLQRLLGEALPLAGKGLSVTLGQLRHYQVEMEFWFASRQVDAEQLDRLVAR
HTHPGLARPAAQPTLLNGMFKGFIDLAFEQDGRYYVADYKSNWLGPDIQAYDGLAMEKAI
LEHRYDLQYVLYVLALHRQLRARLPDYDYDRHVGGALFIFLRGASSSGHGVYHAKPPREL
IESLDALFRGEHPPMQQDLFAGAMI
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaccgtcccctggcactgagtttccccctgcatggcagccagctgatcgag
gccagtgccggcacgggcaagacttttaccatttctgcgctgtacttgcgcctgatcctc
ggccatggcggcgagcagggcttcgatcgcgagctgctgccaccgcaaatcctggtggtg
accttcactgacgccgcgaccaaagagctgcgcgagcgcatccgcgcccgcctggcggaa
gccgcgcggttcttccgcggtgaactgcaagccgctgatccgctgttgcatcaactgcgt
ggtgactacccggaagaggcctggccgcgctgtgccgggcgcctggaaatcgccgtgcaa
tggatggacgaggccgccgtgtcgaccatccacggctggtgccaacgcatgctgcgcgag
cacgccttcgacagcggcagcctgttcacccagaccctggaaaccgaccacagcgacttg
ttggcgcaagtggtgcgcgattactggcggcgcttctgctatggcatgcagggcgatgcg
ctggcctgggtgcgcaaccactggggcagccccgacgccttgctgccgcgcatccgcccg
ctgttcggccgggtgcgcgcccagcaggaagggctggaaccggcggcgctgatccaggcg
tcgctgcaacagcgtggcgagcaattggcccggctcaaggcgccatgggcgcaatgggcg
gaggagctgcggcagatctgccatgctgcggtggccgccaagcaggtcgatggccgcaag
atgcgcgcacagtattttgattcctggtgcgacaagctgtgcgcctgggctgctgacgag
cagctggtcgagctggagctgggcagcggcttcagccgcctgacgccggcgggcatgctt
gacgcgtggaagtccggtgagccacccgtccacccggccctcgatgccatgcaggccctg
cagcagcagttgcaagccctggacagcccggaggcgcccttgctcgagcacgccgccagc
tgggtatcggcacgtttcgaagtggaaaaacggcggcgtgcggaaatgggcttcgacgat
atgctccttcgcctgcaacacgccctggccagcgaggccggcgaacgcctggccgggctg
atccgcgaacagtttccggtcgccctgatcgacgaattccaggacaccgacccggtgcag
tacggcatcttcgagcgtatctaccggatcagcgagaaccgcgcgcagaccgggctgttc
atgatcggcgaccccaagcaggcgatctacgccttccgtggcgccgacatctacacctac
cttgctgcgcgccgcgccaccagcggccgcctgcacagcctggataccaactaccgctcc
agcaaggccatggtcgcagcggtgaaccagctgttcctgcaggccgaggcgcgtgaagcc
gggcgcggggcgttcctgttccgcgaggccgatgacaacccgctgccgttcatcgaggtt
cgtgccaaaggccgggacgagcaattgctgatcgacggtgaaccctgtgccgccctgcaa
tgctggcagctggaaagcgaggagcccgtttccggcagcgtctaccgccagcaactggcc
gccagttgcgccagccatatcgttgccttgctcaatggtggccagcagggcagtgcaggt
ttccgcactgccgagggcgaactgcgcccgtgcctgccctctgacatcgccatcctggtg
cgtgatgggcacgaggcgcaaatggttcgtgccgagctggccgcgcgcgaagtgcgcagc
gtctacctgtccgacaaggactcggtattcgccgcccaggaagcgcacgacctgctggcc
tggctgaaggcctgtgccgaacccgactcggagcgcctgctcaaggccgccctggccagc
ctgaccctcaatctgtcgctggcggcgctggaccggctgaaccaggacgagcgcgtctgg
gaagactgggtcatgcgttttcgccgttaccgcgatatctggcagcgccagggcgtgctg
ccaatgctgcggcatctgctgcatgacttccagctgccgcgcacgctgatccgccgcagt
gatggcgagcgggtgctgaccaacctgctgcatctggccgagctgttgcagcaggccgct
ggcgaactggacggcgaacaagcgctgattcggcatctggccgagcacctggccagttcc
gggcaggccggcgaggagcagatcctgcgcctggagagcgacgagcaactggtcaaggtg
gtgaccattcacaagtccaagggcctggaatacccgttggtctacctgccgttcatctgt
accagcaaaccggtcgatggcagccgtctgccgctggcctggcatgacagcctgggtaac
gctcatctcaccctcacgcccgacccggaacagatcgcgcgcgccgatgacgagcgcctg
gccgaggacctgcgcctgctctacgtggccctgacccgggcccagcatgcctgctggctg
ggcgttgccgacctcaagcgcggtaaccagagaagctcgcagttgcaccgttcggcgttc
ggctacctgcttggtggcggcctcgccttgccgagctcggagcaactggggagctggttg
caggccctggcggcaaccagcccgcacatcagctgcccaggcctgccgcaggcggatcag
cagctgtaccgcatgccacatgccgcgcgagagctgctgccggcccgcaagccgcgccgc
gcggcggccgagcactggtggatcgcctcgtacagcgccctgcgcattggcgagcaagcg
ctcggcgccgacagctcgcaggcacagcaattgttcgacgacgaaagggccgatgcgcag
atgttgcgcgaggtaccggccgacagtggcgatatccaccgcttcccgcgtgggcccaac
cctggcacgttcctccacggcttgctggagtgggcgggccgtgagggcttcagccaggtg
agtggcaacccgcagctgatccaggaaaccgtcggccagcgctgcaaccggcgtgactgg
accggctggatcaccaccctaagccaatggctgcaacgcctgctgggcgaggcgttgccg
ttggcaggcaagggcttgagcgtgacccttgggcagttgcgccactatcaggtcgaaatg
gagttctggttcgccagccgtcaggtcgatgccgaacagctcgaccgcctggtggctcgc
catacccaccccggcctggcgcgtccggcggcgcaaccaaccttgctcaacggcatgttc
aaaggcttcattgacctggcgttcgagcaggacgggcgctactacgtggccgattacaag
tccaactggctgggcccggacatccaggcctacgatggcctggccatggaaaaagccatt
ctcgaacaccgttacgacctgcagtacgtgttgtatgtgctggccctgcatcgccagctg
cgcgctcgcctgcccgattatgactacgaccgccatgtcggcggcgccctgttcatcttc
ctgcgcggtgccagcagcagcggccacggcgtgtatcacgccaagccgccgcgtgagctg
atcgaaagcctcgatgcgctgttccgcggcgagcacccgcccatgcagcaggacctgttt
gccggagccatgatatga
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integrated database retrieval system
