KEGG   Pseudomonas anuradhapurensis: HU763_023710
Entry
HU763_023710      CDS       T07691                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
panh  Pseudomonas anuradhapurensis
Pathway
panh00300  Lysine biosynthesis
panh00470  D-Amino acid metabolism
panh01100  Metabolic pathways
panh01110  Biosynthesis of secondary metabolites
panh01120  Microbial metabolism in diverse environments
panh01230  Biosynthesis of amino acids
Module
panh_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:panh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HU763_023710 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HU763_023710 (dapF)
Enzymes [BR:panh01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HU763_023710 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF SPO11_like
Other DBs
NCBI-ProteinID: QXI47720
LinkDB
Position
5198336..5199166
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPNNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIELDVQNDGQVSVDM
GPPRFSPADIPFVADEQALSYPLEVDGQVYPIAALSMGNPHAVLRVDDVRSAPVHQLGPK
IENHPRFPQRVNAGFLQIVDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPV
SLDLPGGRLHIEWAGPGKPVLMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcatgggctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcacatccagcccaagcacgccaaacagtggggcgaccgccacacc
ggcatcggcttcgaccagttgctgatcgtcgaggcaccgaacaacccggaagtggacttc
cgctaccgcatcttcaacgccgacggctcggaagtcgagcagtgcggcaacggtgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccgcgaagaagcgcattcgcgtggaa
accaagagcggcatcatcgaactggacgtgcagaacgacggccaggtcagtgtcgacatg
ggcccgccacgcttcagccctgcggacattcccttcgtcgccgacgagcaggcgctgagc
tacccgctggaagtcgacggccaggtgtatccgattgccgccctgtccatgggtaacccg
catgccgtgctgcgggtcgacgacgtgcgtagcgcccctgtgcaccagctggggccgaaa
atcgaaaaccacccacgcttcccgcagcgggtgaatgccggcttcctccagatcgtcgac
cgtcaccgcgccaacctgcgcgtgtgggagcgcggtgcgggcgaaacccaggcctgcggc
accggcgcctgcgccgctgccgtcgcggcgatcagccagggctggatggattccccggtg
tccctcgacctgcccggtggccgcctgcacatcgaatgggccggccccggcaaaccggtg
ctgatgactggcccggccgtacgcgtctacgaaggacaggttcgtctctaa

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