Polynucleobacter antarcticus: DCO16_00395
Help
Entry
DCO16_00395 CDS
T08332
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DCO16_00395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pani03021
]
DCO16_00395
03400 DNA repair and recombination proteins [BR:
pani03400
]
DCO16_00395
Enzymes [BR:
pani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DCO16_00395
Transcription machinery [BR:
pani03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DCO16_00395
DNA repair and recombination proteins [BR:
pani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DCO16_00395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
DUF6165
Motif
Other DBs
NCBI-ProteinID:
QKM61679
UniProt:
A0A6M9PMB4
LinkDB
All DBs
Position
64364..65344
Genome browser
AA seq
326 aa
AA seq
DB search
MQTNLLKPKIISVEALTANQAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVAIAG
VVHEYSTLDGVQEDVVNLLLNIKGIVFKLQSRDEVTINLRKEGPGLVTAKDIDLPHDVEI
INPEHVIAHLSAGGKLDMQIKVEKGRGYVPGNVRQYQDETTKIIGRIVLDASFSPVSRVS
YAVESARVEQRTDLDRLVMTIETNGVLSPEEAIRQAATILVDQLVVFAALESSEASGDLA
PSRSSMVDPMLMRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKDVLAARGLSLGMKLESWPPANLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaatttgctcaaaccaaaaattatttctgttgaagcgcttactgccaaccaa
gctaaggttgttatggagccgttcgagcgtggttatggccacacactcggaaatgcatta
cgtcgtgtcctgttgtcatctatggttggttatgcgccaactgaagttgctatcgcaggc
gttgttcatgagtactccacattagatggcgtacaagaagacgttgttaatcttctattg
aacattaaaggtatcgtgtttaagttgcaatcccgtgatgaagtcaccatcaatttgcgt
aaagaaggtccaggcctcgttactgcaaaagatatcgatttgccacatgatgtagaaatt
attaaccctgaacatgtcattgctcacttatctgctggtggtaagttagacatgcagatt
aaggttgaaaaaggtcgtggctatgtaccaggtaacgtacgtcaatatcaagatgaaact
accaagatcatcggccggattgttttagatgcctcatttagtccagtaagtcgtgtgagc
tatgcggttgagtctgcacgtgtggaacagcgcactgaccttgatcgtctcgtcatgaca
atcgagacaaacggtgtcttgtctcctgaggaagcgattcgtcaagctgcgactattctg
gttgatcagttagttgtctttgcagccttggagagtagtgaagcttctggtgatttagca
ccaagccgttcatctatggttgacccaatgttgatgcgtccggtagatgatcttgagctg
acagtgcgctctgccaattgtttgaaggcagagaacatttattacatcggtgacttgatt
caacgtacagagaatgaattgttgaagacgcctaatttaggtcgtaagtctttgaatgaa
atcaaggatgtactggcggctcgtggcttaagtcttggcatgaaactcgaaagctggcct
ccagctaacctcgagaaataa
DBGET
integrated database retrieval system
