KEGG   Polynucleobacter antarcticus: DCO16_00590
Entry
DCO16_00590       CDS       T08332                                 
Name
(GenBank) VapC toxin family PIN domain ribonuclease
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
pani  Polynucleobacter antarcticus
Brite
KEGG Orthology (KO) [BR:pani00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pani03016]
    DCO16_00590
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pani02048]
    DCO16_00590
Transfer RNA biogenesis [BR:pani03016]
 Prokaryotic type
  tRNA degradation factors
   DCO16_00590
Prokaryotic defense system [BR:pani02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    DCO16_00590
SSDB
Motif
Pfam: PIN DUF5805 tRNA_int_end_N3 SctB2
Other DBs
NCBI-ProteinID: QKM63553
UniProt: A0A6M9Q4T0
LinkDB
Position
100510..100896
AA seq 128 aa
MLDTNMVSGLIKQHPNIVRKITSIPMEQLCLSAISEGEILFGLAKKPQAKNLRRVVEEFL
KRVDVLGWDSQVAERYGKLRADLELNGVLLGALDVQIAAHALSENTILVTNDQAFKRVKQ
LKIEDWTQ
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcttgacaccaatatggtgagtggcctgataaaacaacaccctaatatagtgagaaag
attactagtattcctatggaacagctgtgtttatcggctatttctgagggagaaatacta
tttggcttggctaaaaaacctcaagccaagaaccttcgtagagtagtggaagaattctta
aagcgagtagatgttcttgggtgggatagtcaagttgctgagcgttatggtaagttgagg
gcagacttagagctaaatggggtgttattaggggctttagatgttcaaatcgcagcgcat
gctttaagcgaaaacaccatcttagtgaccaatgaccaagcgtttaaaagggtcaagcag
ttaaagattgaagattggacgcagtaa

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