Polynucleobacter antarcticus: DCO16_01405
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Entry
DCO16_01405 CDS
T08332
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DCO16_01405 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pani03400
]
DCO16_01405 (xseA)
Enzymes [BR:
pani01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DCO16_01405 (xseA)
DNA repair and recombination proteins [BR:
pani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DCO16_01405 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF1508
VMAP-M1
Motif
Other DBs
NCBI-ProteinID:
QKM61853
UniProt:
A0A6M9Q0Y6
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All DBs
Position
255094..256302
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AA seq
402 aa
AA seq
DB search
MEISREILSVGDLNRAIASSLEERFDIVWVSGEISNFKAYDSGHWYFSLKDEEGQIRSVM
FRGRNSQVGFLPQSGDLVEVSASLGMYVPRGDIQLTIQTLRRAGMGGLYEAFLKLKAKLA
KAGLFDAERKQEIPTHPRSIGIITSPQAAALKDVLSTLARRAPHIPIVIYPTLVQGTDAP
RGIIAALHAAEKEQAVDVILLVRGGGSIEDLWAFNDEQLAYAIAQSPIPVVSGVGHETDT
TIADFVADLRAPTPTGAAELAAPRKDQLLQELAAIEQALLQRVTQRVEREAQTLDQLALR
LSHALPNPERMREQIRHWQQRLNQAWIVRVDSWKRTQSHQQQQLEMLNPQRTLERGYAVV
LNTKEGIHAVRKPKELCLNIDFEIRLAEGVASVQFATITPEK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ttggaaatatcaagggaaattctgagtgttggcgatctgaaccgcgccattgcgagctcc
ttagaggagcgcttcgatatcgtttgggttagcggggagatttctaacttcaaggcttat
gacagtggacattggtacttctccctcaaggacgaagaagggcaaattcgtagtgtgatg
tttcgggggcgcaatagccaggttggtttcctgccccaatctggggatttagtagaagtc
agtgccagtctaggaatgtatgtacctaggggcgatattcaacttaccatccagacgctc
agacgggcgggtatgggaggtctttacgaagccttcttaaaactcaaggccaagctggct
aaagcgggtttatttgatgcagagcgcaaacaagaaatacccacccaccccagatcgatt
ggcattattacttcaccccaagccgcggcattaaaagatgtgttgagtaccttggcgaga
cgagctccccatattccgattgtgatttaccccaccttggttcaggggactgatgcacct
agaggaatcattgctgcacttcacgccgctgaaaaagagcaggctgtggatgtgatttta
ttggtgaggggtggcggcagtattgaagatttgtgggcctttaatgatgagcagttggct
tatgccatcgcgcagtctcccattccggtagtgagtggtgtcggccatgaaaccgatacg
acgattgcagattttgttgcagacctcagagcacccactccaacaggtgctgcggaatta
gcagcaccacgtaaagaccagctattacaagagcttgcagcaattgagcaagccctcttg
caaagagtcactcagcgcgtagagcgcgaggctcaaactttagatcagcttgccttgcga
ttaagccatgcattgccgaacccagagcggatgcgtgaacaaatacgccactggcaacaa
cgactcaatcaggcttggatagtgcgagtcgattcatggaaaagaacgcaaagccaccag
caacaacaattagaaatgctcaatccacaacgcacattggagcggggttatgccgttgta
ctaaatactaaagaaggtattcacgcagtgcgcaagcctaaggagctgtgtctgaatata
gattttgaaattcgcttagctgagggggtagcgagcgtacagtttgcaacaatcacaccc
gagaaatga
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