Polynucleobacter antarcticus: DCO16_04345
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Entry
DCO16_04345 CDS
T08332
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pani
Polynucleobacter antarcticus
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pani01011
]
DCO16_04345
Enzymes [BR:
pani01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DCO16_04345
Peptidoglycan biosynthesis and degradation proteins [BR:
pani01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DCO16_04345
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
QKM62360
UniProt:
A0A6M9PHL0
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All DBs
Position
830906..832327
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AA seq
473 aa
AA seq
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MSWRYGAIVLIVALSGCASSGDWTSDSSTRNDPRAFKAQKVDLQKQSVSKLYAPSSNLWI
RIRDGFELEPMNTPLEIAQVRWLANRPDYVNRTMARSSRYLFYIVQEVNTRNMPMEIALL
PFVESAFVTHAKSSAKAMGLWQFMPATGKDFSLTQNVFRDERRDVLQSTDAALDYLQRLY
KQFGSWDLALAAYNWGEGNVTKAQKRNLAKGLPTDYLSLSMPNETRNYVPKLMAYRQIVL
DPQAFGIVLPELENHPYFVAIEVANDIDVAVVIELAEIPAEEFHSLNPSFNKPVILSNAN
QQILLPFGHAEVFQENLKKYTKPLSSWTAVLITKTESVDQAAKALGADPNTLREVNGIPK
GMRIRAGSTVLVPKTSRRYGDISVAMAENASLNLAKPAPAAPKNCAAGAKCPSATPAKGT
NKAATKGNSSVKNAATQHKPASTGPEKSAKNTTTKANSPAAKVADGKGLSKTQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggcgctatggggcaatagtgctgattgttgctctgtctggttgcgcaagtagt
ggggattggacatccgatagctcaacgcgaaatgatcctcgcgcttttaaggcgcaaaaa
gttgaccttcaaaagcaatctgtcagcaagctatatgcgccatctagcaatctatggata
cgcattcgggatggctttgaattagagcccatgaatacaccgctagagattgcccaagta
cgatggctggcgaatcgtcctgactatgtcaatcgcactatggcacgctcatcacgctat
cttttttatattgtgcaagaagtcaatacacgcaatatgcccatggagattgccttactg
ccttttgtggaaagtgcttttgtaacacacgccaaatctagtgctaaagcaatgggcttg
tggcaattcatgccagcgactggtaaggattttagtttgacgcaaaacgtctttagagat
gagcgtcgtgacgtattgcagtcgaccgatgcagccctggattatttacaacgattgtac
aaacagttcggtagctgggatcttgcattggcagcgtataactggggcgagggcaatgta
actaaagcacaaaaacgcaatttggcaaaggggctgccaacggattatctgagccttagt
atgccaaatgaaactcgcaactatgttcctaagttgatggcttaccgtcaaattgtttta
gatccccaagcatttggcattgttttacctgagcttgaaaatcatccttattttgtagcg
atcgaggttgcgaatgatattgatgtagcagtggtgatcgagttagcagaaattccagca
gaggagtttcatagtctcaatccttcatttaataagccagtgattttaagtaatgccaat
caacagattttgttgccatttgggcatgcagaggtatttcaggaaaacctcaaaaaatat
actaagcctctttcctcatggactgctgtgctcatcactaaaaccgagagcgtggatcag
gcagccaaagccctgggggcagatcctaatactcttagagaagtgaatggcattccgaag
ggcatgagaatacgggcagggtccaccgtattggtgcccaaaactagccggcgttacggg
gatatttctgtggcgatggctgaaaatgccagccttaatcttgccaagcctgcacccgct
gcgcctaaaaattgtgctgccggcgctaagtgcccttcagctactccagcaaaagggaca
aataaagccgctactaagggtaattcctcagtaaaaaatgctgcaactcagcataagccc
gcatcgacaggacctgaaaaatctgcgaaaaacacaactacgaaagcgaatagccctgca
gctaaggtagccgatggcaaggggctaagtaaaactcagtaa
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