Polynucleobacter antarcticus: DCO16_04360
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Entry
DCO16_04360 CDS
T08332
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani00220
Arginine biosynthesis
pani00240
Pyrimidine metabolism
pani00250
Alanine, aspartate and glutamate metabolism
pani01100
Metabolic pathways
pani01110
Biosynthesis of secondary metabolites
pani01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DCO16_04360 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DCO16_04360 (carB)
00220 Arginine biosynthesis
DCO16_04360 (carB)
Enzymes [BR:
pani01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DCO16_04360 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
RimK
ATP-grasp_5
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QKM62362
UniProt:
A0A6M9PR60
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All DBs
Position
835650..838913
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AA seq
1087 aa
AA seq
DB search
MPKRSDIKSILIIGAGPIVIGQACEFDYSGAQACKALRDEGFKVILVNSNPATIMTDPEM
ADVTYIEPITWEVVERIIATEKPDAILPTMGGQTALNCALDLHRHGVLEKYGCELIGASP
EAIDKAEDRQKFKNAMTKIGLGSAKSGIAHTMDEAHVVQQRIQIETGSLGFPVVIRPSFT
MGGSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEFEMEVVRDRADNCIIVCS
IENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASIAVLREIGVDTGGSNVQFSINPEDG
RMIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGATPASFEPSID
YVVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGLDEFS
TDLDDIIQEIGEPGPDRVWYLGDAFRMGMGLDEVYAETKIDPWFLEQIEELITIETELKL
RKIDSLSAPELRFIKQKGFSDRRLGKLMGVDASSVRAARHRLKVVPVYKRVDTCAAEFST
NTAYLYSTYEAEHGECESQPTNNNKIMVLGGGPNRIGQGIEFDYCCVHAALALRDDGYET
IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAIEKPKGVIVQYGGQTPLKLALDLER
NGVPIIGTSPDMIDAAEDRERFQKLLHDLKLRQPPNRTARAEDEALKLAEEIGYPLVVRP
SYVLGGRAMEIVHDGRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDCISDGQRVFIG
GVMEHIEQAGVHSGDSACSLPPYSLSESTIAEIKRQTAAMAKGLNVIGLMNVQFAIQNVD
GQDVIYVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQTLDQQGIKAEVLPGYFSVKE
AVFPFNKFPGIDPILGPEMRSTGEVMGVGKTFGEALFKSQLGAGIKLPKSGTVVLTVKDS
DKPKAVEVAKLLHQLGFPMVATKGTAAAIEAAGLPVRVVNKVKDGRPHIVDLIKNGEISL
VFTTVDETRTAIADSRSIRTSAQANNVTYYTTISAARAVMDGLMASQSGNKDALEVYSLQ
NLHKTLH
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgtagcgatattaaaagtattctgattattggtgcaggtccgattgtgatt
ggtcaagcttgtgagtttgattattccggtgcgcaggcttgcaaggcattgcgggatgaa
ggcttcaaagtcatccttgtgaatagcaacccagcgaccatcatgactgatccagaaatg
gccgatgtgacttatatcgagccgattacttgggaagttgttgaacgtattattgccact
gaaaaaccggatgcgattttgccaacgatgggcggacaaactgctcttaattgcgcctta
gatttacatcgccatggtgttctggagaaatacgggtgcgagttgattggtgcatcacca
gaagcgattgataaagccgaagatcgtcagaagtttaaaaatgccatgaccaaaattggt
ttaggttctgcgaagtctggcattgcgcacactatggatgaggcgcatgtcgtgcagcag
cgcatccagattgagacggggagcttaggctttcctgtggtgattcgtccttccttcacg
atgggtggatctggcggtggtattgcttataaccgcgaagagttcgaagaaatttgtaag
cgaggtttagatctctcgccaacccgtgagctcttgattgaagagtctctccttggctgg
aaagagtttgaaatggaagtcgtgcgggatcgcgcggataactgcatcatcgtatgttct
attgaaaactttgatccgatgggtgtgcataccggagattcgattacggttgctcctgca
caaaccttaacggataaagagtatcaaattctgcgtaatgcctcgatagcagtgttgcgt
gaaattggtgttgatacgggtggctctaacgtacagttctcgattaatccagaagatggc
cgcatgattgtgattgagatgaacccacgggtttctcgttcatctgcgttggcatctaag
gcaacaggttttccaatcgcgaagattgccgcgaagttagcagtgggttacacactagat
gagttaaagaatgacatcacgggtggtgctacacccgcttcatttgaaccttcaatcgat
tacgttgtcacgaagattcctcgctttgcttttgagaagttcccccaagcggattcgcgt
ttaacgacacagatgaagtccgtaggtgaggtgatggcgattggccgaacattccaagaa
tccttccaaaaagctctacgtggtttagaggtcggtgtagatggtttagatgaattttct
actgacttagacgacatcattcaagaaattggtgagccaggcccagaccgtgtttggtat
ttgggtgacgctttccggatgggcatgggtctggatgaggtgtatgcagagaccaaaatt
gatccttggttcttagagcaaatcgaagagctgattacgattgaaactgaactcaagctg
cgtaagattgatagcttgtctgctccagaattacgctttattaagcaaaaaggtttttca
gatcgacgtttgggcaagctgatgggtgttgatgcttcctcggtgcgtgcagcgcgtcat
cgcttaaaggttgtaccggtttacaagcgggtagatacctgcgcggcagagttttcaaca
aatacagcgtatttgtattccacttatgaggctgagcatggtgaatgcgaatcccagccg
accaataacaataagatcatggtactgggcggcggtcctaaccgaattggtcaaggtatc
gagtttgattattgctgtgttcatgctgctttagcactacgtgacgatggttatgaaacc
attatggtgaactgcaaccctgaaaccgtttcgactgactacgatacttccgatcgtttg
tactttgaacctttgacattagaagatgttctcgagatcgtagcgatagaaaaacctaag
ggcgtgatcgtgcagtatggcggtcagacacctttgaaattggctttagatctagaacgt
aatggcgtgccaattatcggaacttcgccagacatgattgatgctgccgaagatcgtgag
cgttttcagaagttattacatgatttaaaactacgtcaaccacctaaccgcacagcccgt
gccgaagatgaagcgcttaagctcgctgaggaaattgggtatccattggttgtgcgtcct
tcctacgttttaggtggtcgcgccatggaaattgtgcatgatggtcgtgatcttgaacgc
tatatgcgtgaagcagtcaaagtgtcacatgactctcccgtattacttgatcgcttctta
aatgatgcgattgaatgcgatgtggattgtattagtgatggtcaacgtgtctttatcggc
ggcgtgatggagcatattgagcaagcaggtgtccactctggcgactctgcctgttcattg
cccccttattcattatcagaaagcacgattgctgagattaagcgtcagactgctgccatg
gctaaaggtttgaacgtgatcggcttaatgaatgtgcaattcgcgattcagaatgtcgat
ggccaagatgtcatctatgttctcgaggttaatccccgcgcttcgcgtactgtgccattt
gtatcgaaagccacgggcttacagttggcgaagattgcagcacgctgtatggtggggcag
acactcgatcagcagggtattaaggctgaagtactgcctggctacttctcagtcaaagaa
gctgtcttcccatttaataaatttccaggcatcgatcctatcttaggaccagaaatgcgc
tctacaggcgaagtgatgggagttggtaaaacgtttggtgaagccctctttaaatctcaa
ttgggtgctggtatcaagttaccgaagagcggtacggttgtcctgacagtaaaggatagc
gataagcctaaagcagtggaggttgctaagctcttgcatcaattaggatttccgatggtg
gctactaaaggcactgctgcggcaattgaagcggctggtttaccagtacgggttgttaat
aaggtgaaggatggtcgtccgcatatcgtagatttaattaagaacggggaaatttccttg
gtatttaccaccgtagatgaaacccgcactgcgattgcagattcacgatcaattcgaacg
agcgctcaagcaaataacgttacgtattacacgacgattagtgcagcacgtgctgtgatg
gatggtttgatggcatcacaaagtggcaataaagacgcacttgaggtgtattcattacaa
aatttacataagacgctccattga
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