KEGG   Polynucleobacter antarcticus: DCO16_05015
Entry
DCO16_05015       CDS       T08332                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pani  Polynucleobacter antarcticus
Pathway
pani00010  Glycolysis / Gluconeogenesis
pani00020  Citrate cycle (TCA cycle)
pani00260  Glycine, serine and threonine metabolism
pani00280  Valine, leucine and isoleucine degradation
pani00310  Lysine degradation
pani00380  Tryptophan metabolism
pani00620  Pyruvate metabolism
pani00630  Glyoxylate and dicarboxylate metabolism
pani00640  Propanoate metabolism
pani00670  One carbon pool by folate
pani00785  Lipoic acid metabolism
pani01100  Metabolic pathways
pani01110  Biosynthesis of secondary metabolites
pani01120  Microbial metabolism in diverse environments
pani01200  Carbon metabolism
pani01210  2-Oxocarboxylic acid metabolism
pani01240  Biosynthesis of cofactors
Module
pani_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pani_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pani_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:pani00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DCO16_05015 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DCO16_05015 (lpdA)
   00620 Pyruvate metabolism
    DCO16_05015 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DCO16_05015 (lpdA)
   00640 Propanoate metabolism
    DCO16_05015 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DCO16_05015 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DCO16_05015 (lpdA)
   00310 Lysine degradation
    DCO16_05015 (lpdA)
   00380 Tryptophan metabolism
    DCO16_05015 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DCO16_05015 (lpdA)
   00670 One carbon pool by folate
    DCO16_05015 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pani04147]
    DCO16_05015 (lpdA)
Enzymes [BR:pani01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DCO16_05015 (lpdA)
Exosome [BR:pani04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DCO16_05015 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Pyr_redox_3 AlaDh_PNT_C NAD_binding_8 Biotin_lipoyl_2 FAD_binding_2 PASTA 3HCDH_N Thi4 FAD_binding_3 GCV_H HI0933_like HlyD_D23 DUF7408
Other DBs
NCBI-ProteinID: QKM62480
UniProt: A0A6M9PHZ7
LinkDB
Position
959944..961749
AA seq 601 aa
MAKQTILIPDIGDNSDIPIIEVLVKVGDVIQKEQALLVLESDKATMEIPSDAAGTIISLS
VKAGDKVSKGSIVAEIEVVANSVTAIAAAPAAEAATAQIQTLVPAAASVATIASASQYAG
KVDHECEVLVLGAGPGGYSAAFRSADLGKNVVLVERYATLGGVCLNVGCIPSKALLHTTA
VMDEVKTMAKHGISYGAPKIEIDQLRGYKDSVIGKLTSGLAGMAKARKVKVVRGLGHFLD
AHHVEVTLTSGEGQTLTSQKEVIRFEKAIIAAGSQPVMLPFMPKDPRVVDSTGALLLKSI
PKRMLVIGGGIIGLEMATVYSTLGAQIDIVEMLDGLMAGADRDLEKVWEKFNAGRFENIM
LKTRASKAEATANGIVVSFEGDNAPAGPQIYDLVLVAVGRTPNGKKIDAALAGVVVDERG
FISVDNQMRTNVNHIFAIGDIVGQPMLAHKAVHEGHVAAEVAAGEKSYFDAKQIPSVAYT
DPEVAWAGLTEEQCKAQGIAYEKGLFPWAASGRAIANGRDEGFTKLIFDASSKRIIGGGI
VGTHAGDLIGEVCLAIEMGADAVDIAKTIHPHPTLGESVGIAAEAALGHCTDLPPVKKKA
H
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggctaagcaaacgattctcattccagatattggtgacaactcagatattccaattatt
gaagtattggtgaaggtgggtgatgtcattcaaaaagagcaggctctattggtattagag
tctgacaaggcaacgatggaaattccttctgatgctgccggtacgattattagtttgtca
gtaaaggcaggtgataaggttagtaaaggcagtatcgtcgctgaaatagaagtagtagct
aattcagttacggcaattgcagcggctcctgccgctgaagcagccacagctcagattcaa
actctggtcccagctgctgcttctgtagctactatcgctagcgctagccaatatgccgga
aaagttgatcatgagtgtgaagtgcttgtactcggtgcggggcctggtggctatagcgca
gcctttcgtagtgcagacttaggaaagaatgttgttttagtagagcgctatgctacctta
ggcggtgtctgtctgaacgtgggctgtattccctctaaggctttattgcacaccactgca
gtcatggatgaagtcaaaaccatggcaaagcatggcattagctacggcgcacctaagatt
gagattgatcaattgcgcggctataaagattccgtgattggtaagttaaccagtggcctg
gcgggcatggcgaaggcgcgtaaagtgaaggtggtgcgcggacttggccactttttagat
gcgcatcatgtggaagttactttaacgagtggcgaaggtcaaacgctcactagccaaaaa
gaagtcattcggtttgagaaggcgattattgctgcaggtagccagccagtgatgttgcca
tttatgcctaaagatccaagggtggtcgacagtacaggtgctttgctattaaagagtatc
ccaaaacgcatgttagtcattggtggcggcatcattggtttagagatggctacggtctat
agcaccttaggtgcccagattgatattgtagaaatgctggatggcttgatggctggagct
gatcgtgatttagaaaaggtctgggagaaattcaacgcaggtcgttttgaaaatatcatg
ctcaaaactcgcgctagtaaagctgaagcaacggccaacggaattgtagtgagctttgag
ggagataatgcacctgcagggcctcagatctatgacctcgttttagtcgcagtagggcgt
acgccaaatggtaaaaagattgatgctgcccttgctggggttgtagtagatgagcgtggt
tttatttctgttgataatcaaatgcgcacaaatgttaatcatatttttgcaattggcgat
attgtgggtcagccgatgctggcgcacaaggctgttcatgaaggtcatgtagcagcagaa
gttgctgcaggtgagaagtcttattttgatgctaagcagataccttctgtagcttatacc
gatcctgaagtagcctgggctggcctcacagaagagcaatgtaaggcacagggtattgct
tatgagaagggcttatttccttgggcggcgagtggcagggcgatcgccaatggacgagac
gaaggatttactaagttaatttttgatgccagtagcaaacgtattattggcggcggtatt
gttggcacccatgccggtgatttaattggtgaagtctgcttagccattgagatgggagct
gatgctgttgatattgctaagaccattcatccacatcccacattaggtgagtcagtaggc
attgctgctgaggctgcactgggccattgcactgatcttcctccagtgaaaaagaaagca
cattaa

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