Polynucleobacter antarcticus: DCO16_05015
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Entry
DCO16_05015 CDS
T08332
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani00010
Glycolysis / Gluconeogenesis
pani00020
Citrate cycle (TCA cycle)
pani00260
Glycine, serine and threonine metabolism
pani00280
Valine, leucine and isoleucine degradation
pani00310
Lysine degradation
pani00380
Tryptophan metabolism
pani00620
Pyruvate metabolism
pani00630
Glyoxylate and dicarboxylate metabolism
pani00640
Propanoate metabolism
pani00670
One carbon pool by folate
pani00785
Lipoic acid metabolism
pani01100
Metabolic pathways
pani01110
Biosynthesis of secondary metabolites
pani01120
Microbial metabolism in diverse environments
pani01200
Carbon metabolism
pani01210
2-Oxocarboxylic acid metabolism
pani01240
Biosynthesis of cofactors
Module
pani_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pani_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pani_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DCO16_05015 (lpdA)
00020 Citrate cycle (TCA cycle)
DCO16_05015 (lpdA)
00620 Pyruvate metabolism
DCO16_05015 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DCO16_05015 (lpdA)
00640 Propanoate metabolism
DCO16_05015 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DCO16_05015 (lpdA)
00280 Valine, leucine and isoleucine degradation
DCO16_05015 (lpdA)
00310 Lysine degradation
DCO16_05015 (lpdA)
00380 Tryptophan metabolism
DCO16_05015 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DCO16_05015 (lpdA)
00670 One carbon pool by folate
DCO16_05015 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pani04147
]
DCO16_05015 (lpdA)
Enzymes [BR:
pani01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DCO16_05015 (lpdA)
Exosome [BR:
pani04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DCO16_05015 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
AlaDh_PNT_C
NAD_binding_8
Biotin_lipoyl_2
FAD_binding_2
PASTA
3HCDH_N
Thi4
FAD_binding_3
GCV_H
HI0933_like
HlyD_D23
DUF7408
Motif
Other DBs
NCBI-ProteinID:
QKM62480
UniProt:
A0A6M9PHZ7
LinkDB
All DBs
Position
959944..961749
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AA seq
601 aa
AA seq
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MAKQTILIPDIGDNSDIPIIEVLVKVGDVIQKEQALLVLESDKATMEIPSDAAGTIISLS
VKAGDKVSKGSIVAEIEVVANSVTAIAAAPAAEAATAQIQTLVPAAASVATIASASQYAG
KVDHECEVLVLGAGPGGYSAAFRSADLGKNVVLVERYATLGGVCLNVGCIPSKALLHTTA
VMDEVKTMAKHGISYGAPKIEIDQLRGYKDSVIGKLTSGLAGMAKARKVKVVRGLGHFLD
AHHVEVTLTSGEGQTLTSQKEVIRFEKAIIAAGSQPVMLPFMPKDPRVVDSTGALLLKSI
PKRMLVIGGGIIGLEMATVYSTLGAQIDIVEMLDGLMAGADRDLEKVWEKFNAGRFENIM
LKTRASKAEATANGIVVSFEGDNAPAGPQIYDLVLVAVGRTPNGKKIDAALAGVVVDERG
FISVDNQMRTNVNHIFAIGDIVGQPMLAHKAVHEGHVAAEVAAGEKSYFDAKQIPSVAYT
DPEVAWAGLTEEQCKAQGIAYEKGLFPWAASGRAIANGRDEGFTKLIFDASSKRIIGGGI
VGTHAGDLIGEVCLAIEMGADAVDIAKTIHPHPTLGESVGIAAEAALGHCTDLPPVKKKA
H
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcaaacgattctcattccagatattggtgacaactcagatattccaattatt
gaagtattggtgaaggtgggtgatgtcattcaaaaagagcaggctctattggtattagag
tctgacaaggcaacgatggaaattccttctgatgctgccggtacgattattagtttgtca
gtaaaggcaggtgataaggttagtaaaggcagtatcgtcgctgaaatagaagtagtagct
aattcagttacggcaattgcagcggctcctgccgctgaagcagccacagctcagattcaa
actctggtcccagctgctgcttctgtagctactatcgctagcgctagccaatatgccgga
aaagttgatcatgagtgtgaagtgcttgtactcggtgcggggcctggtggctatagcgca
gcctttcgtagtgcagacttaggaaagaatgttgttttagtagagcgctatgctacctta
ggcggtgtctgtctgaacgtgggctgtattccctctaaggctttattgcacaccactgca
gtcatggatgaagtcaaaaccatggcaaagcatggcattagctacggcgcacctaagatt
gagattgatcaattgcgcggctataaagattccgtgattggtaagttaaccagtggcctg
gcgggcatggcgaaggcgcgtaaagtgaaggtggtgcgcggacttggccactttttagat
gcgcatcatgtggaagttactttaacgagtggcgaaggtcaaacgctcactagccaaaaa
gaagtcattcggtttgagaaggcgattattgctgcaggtagccagccagtgatgttgcca
tttatgcctaaagatccaagggtggtcgacagtacaggtgctttgctattaaagagtatc
ccaaaacgcatgttagtcattggtggcggcatcattggtttagagatggctacggtctat
agcaccttaggtgcccagattgatattgtagaaatgctggatggcttgatggctggagct
gatcgtgatttagaaaaggtctgggagaaattcaacgcaggtcgttttgaaaatatcatg
ctcaaaactcgcgctagtaaagctgaagcaacggccaacggaattgtagtgagctttgag
ggagataatgcacctgcagggcctcagatctatgacctcgttttagtcgcagtagggcgt
acgccaaatggtaaaaagattgatgctgcccttgctggggttgtagtagatgagcgtggt
tttatttctgttgataatcaaatgcgcacaaatgttaatcatatttttgcaattggcgat
attgtgggtcagccgatgctggcgcacaaggctgttcatgaaggtcatgtagcagcagaa
gttgctgcaggtgagaagtcttattttgatgctaagcagataccttctgtagcttatacc
gatcctgaagtagcctgggctggcctcacagaagagcaatgtaaggcacagggtattgct
tatgagaagggcttatttccttgggcggcgagtggcagggcgatcgccaatggacgagac
gaaggatttactaagttaatttttgatgccagtagcaaacgtattattggcggcggtatt
gttggcacccatgccggtgatttaattggtgaagtctgcttagccattgagatgggagct
gatgctgttgatattgctaagaccattcatccacatcccacattaggtgagtcagtaggc
attgctgctgaggctgcactgggccattgcactgatcttcctccagtgaaaaagaaagca
cattaa
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