Polynucleobacter antarcticus: DCO16_05205
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Entry
DCO16_05205 CDS
T08332
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani00260
Glycine, serine and threonine metabolism
pani00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pani01100
Metabolic pathways
pani01110
Biosynthesis of secondary metabolites
pani01230
Biosynthesis of amino acids
Module
pani_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DCO16_05205 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
DCO16_05205 (trpB)
Enzymes [BR:
pani01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
DCO16_05205 (trpB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
QKM62516
UniProt:
A0A6M9PXE4
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All DBs
Position
995109..996302
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AA seq
397 aa
AA seq
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MYDKPDSRGHFGPYGGVFVSETLMFALDELKAAYAKYQYDPEFLEEFHYELKHFVGRPSP
VYHAKRWSEMLGGAQIYLKREDLNHTGAHKINNVIGQAMLARRMGKPRIIAETGAGQHGV
ATATICARFGLDCTVYQGSVDVARQAQNVFRMKLLGAKVVPVESGTKTLKDALNEAMRDW
VTNVDDTFYIIGTVAGPHPYPMMVRDFQSVIGEECKVQMPELTGRQPDYVMACVGGGSNA
MGIFYPYIDYPEVKLVGVEAAGHGLMSGLHSAALCVGKPGVLHGNRTYLLQDENGQISET
HSVSAGMDYPGVGPEHAWLKDSGRAEYAAITDEEALKAFHDCCRIEGIIPALESSHAIAY
ACKLAPTLAKDKTILINLSGRGDKDMHTVAQATGSEG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtacgataagccagattctcgtggacacttcggtccttacggcggtgtgtttgtttct
gaaacattgatgtttgcattagatgagctgaaagctgcttatgcaaagtatcaatatgat
cctgaatttttagaagagttccactacgagctaaagcattttgttggtagaccatcgccg
gtgtatcacgctaagcgctggagcgaaatgctaggcggtgcacagatttaccttaaacgg
gaagatttaaatcatactggcgctcacaaaattaataacgtgattggtcaagctatgtta
gcgagacgtatgggcaagccgcgcattattgctgagacaggagcagggcagcatggtgtc
gcaactgccacaatttgtgctcgctttggtttagattgcacggtctaccaaggctcagtt
gatgtggcacgtcaagcacagaatgtatttcgtatgaaattattaggtgcaaaagtagta
ccagttgaatctggtacaaagactctgaaggatgccttaaacgaagcaatgcgcgactgg
gtcaccaatgttgacgacaccttttacattattggcacggttgctggtccgcatccatac
cccatgatggtgagagattttcaaagtgtcattggggaagagtgcaaagttcaaatgcct
gagctcacaggacgtcaaccggattacgtgatggcctgtgttggaggaggttctaatgca
atgggcatcttctacccctatattgattatcctgaggtgaagttggttggtgttgaggcc
gctggtcatgggcttatgagtggcttacattctgcagcgctgtgcgttggtaagcctgga
gtactgcatggtaatcgcacttatttactacaagatgagaatggtcagatttccgaaact
cattcggtctctgctggtatggactatcccggtgttggtccagagcatgcttggctcaaa
gattctggccgcgctgagtatgcagcgatcactgatgaagaggcgttaaaagccttccac
gattgctgtcgcatcgaaggcattattcccgccctcgagtcttcacatgcgattgcctac
gcttgtaaattagccccgaccctagctaaagataaaactattttgatcaatttatcgggt
cgaggtgataaagacatgcataccgttgctcaagctactggctctgaaggctaa
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