Polynucleobacter antarcticus: DCO16_05945
Help
Entry
DCO16_05945 CDS
T08332
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani00061
Fatty acid biosynthesis
pani00071
Fatty acid degradation
pani01100
Metabolic pathways
pani01212
Fatty acid metabolism
pani02024
Quorum sensing
pani04146
Peroxisome
Module
pani_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DCO16_05945
00071 Fatty acid degradation
DCO16_05945
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DCO16_05945
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCO16_05945
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pani01004
]
DCO16_05945
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pani04147
]
DCO16_05945
Enzymes [BR:
pani01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DCO16_05945
Lipid biosynthesis proteins [BR:
pani01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DCO16_05945
Exosome [BR:
pani04147
]
Exosomal proteins
Exosomal proteins of breast milk
DCO16_05945
Exosomal proteins of breast cancer cells
DCO16_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PTSIIB_sorb
Motif
Other DBs
NCBI-ProteinID:
QKM62638
UniProt:
A0A6M9PT42
LinkDB
All DBs
Position
complement(1137751..1139469)
Genome browser
AA seq
572 aa
AA seq
DB search
MADTINTKSPWLKNYLDGVPAEINLGDYTSLLEIVDESFNQYPDHLALEFMGKSMTYRQL
DILSKNFAAYLQTLKLDSGARVAIMFPNVPQYLIAMLGTLRAGYIVVNVNPLYTSRELEH
QLRDSGASVLVILENFAHVYQSIADQSILKEVIVGSLGETLGAKGLIVNVVVRHIKKLVP
KWNFPHIRFNAALKIGRQHPYVKPELTLDDVAFLQYTGGTTGVSKGAVLLHKNILANIIQ
IEHWLDPVFQHRHLNQKVSEQAKSEQKQLVFLCALPMTHIFALTACALLGMRKGGLLLLV
PNPRDITGFIQFLMKHPNINIFPGVNTLFHALIHRPEFSKVKLPHLLVTIGGGMAVQKKT
ADLWQKLMGVPIAQGYGLSETSPVVCVNTPLITQFTGSIGMPVPSTDVIILDEEGIEVPF
GETGEICIKGPQVMAGYWNRPDETQQSMTADGYFKSGDIGTMSAQGEVHIVDRKKDMIIV
AGFKVFPNEIEEVIASMPGVRECAVIGSPHRKLGEIVKVFIVKDDPDLTQAQVMLYCKQQ
MTSYKRPRKVAFVDEMPKSNVGKILRRYLRDL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacaataaatacaaagtccccttggttaaaaaattatctagatggcgtccct
gctgagattaacttgggtgattacacatccttgttggagatagtagacgagtcatttaac
caatatccggaccatcttgccttagaatttatgggcaagtccatgacttatcgccagctt
gatattctgtcaaaaaacttcgctgcttatttgcaaacgctcaagctcgattctggagcg
cgtgttgctattatgtttccgaatgtgccgcaatatctgattgctatgctgggtacatta
cgagcaggctatatcgtggtgaatgtcaacccgctgtatacgtctcgtgagttagaacat
caattacgtgatagcggtgcaagtgtgctggtgatcttagaaaattttgcgcatgtctat
caatctatagcagatcaatctatcttaaaagaggtcattgttggtagtctaggagagact
ctgggtgctaagggtttgattgttaatgtagtagtgcggcatattaaaaagcttgtacca
aaatggaattttcctcacatccgatttaatgcggctctcaaaattgggcggcaacatccc
tacgtgaaaccagaattgactttggatgacgtagcttttctgcaatatacgggtggaaca
acaggtgtttcaaagggcgcagtactgcttcataaaaatatactcgccaatattattcaa
attgaacactggcttgatcctgtatttcagcatcgccatttaaatcagaaggtaagcgaa
caagctaaatcagagcaaaagcaactggtctttttatgcgccttaccgatgacccatatt
tttgcgcttaccgcttgtgctctactgggtatgcgcaaaggcggacttctattactggtg
cctaacccgagagacatcaccggatttattcaatttttgatgaagcatccgaatatcaat
atttttcctggtgttaatacgctgtttcatgcactaattcatcgccctgaattttcgaaa
gtaaaactaccccatctcttggttactattggtggcggaatggcagtacaaaagaaaaca
gccgatctttggcagaaattgatgggtgttcctattgcacaaggctatgggctatcagag
acctccccagtagtctgtgtcaatacgcccttaatcacacaatttaccggatcgattggt
atgcccgtccctagtacggatgtcatcattttggatgaagagggtattgaggtgccattt
ggtgaaacgggagagatctgcattaagggcccccaagtcatggcagggtactggaataga
ccggatgagacgcagcaatctatgactgccgatggttattttaaatcgggtgatattggc
accatgagtgctcagggtgaagtccatattgtggatcgcaagaaagatatgattatcgtt
gcgggctttaaggttttccccaatgaaatcgaggaagtgattgcctccatgccaggtgta
agagagtgtgccgtgattggctctccgcatcgcaagctaggggagattgtgaaagtcttt
attgtgaaagatgatccagatctgacgcaagcccaggttatgctttattgcaagcagcaa
atgactagctataagcgccctagaaaagtcgcgtttgtagatgagatgccaaaatccaat
gtcgggaaaatattacgtcggtatttaagggatttatag
DBGET
integrated database retrieval system
