Polynucleobacter antarcticus: DCO16_06500
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Entry
DCO16_06500 CDS
T08332
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DCO16_06500
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pani01007
]
DCO16_06500
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pani03016
]
DCO16_06500
Enzymes [BR:
pani01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DCO16_06500
Amino acid related enzymes [BR:
pani01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DCO16_06500
Transfer RNA biogenesis [BR:
pani03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DCO16_06500
Prokaryotic type
DCO16_06500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
QKM62735
UniProt:
A0A6M9PVF1
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All DBs
Position
complement(1235456..1237915)
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AA seq
819 aa
AA seq
DB search
MQFSESWLRQYVNPDLDSQALGHAMTMAGLEVEEQHAVAPPFTKIVVAHILSAELHPDAD
RLRVCKVDVGTGQELQIVCGAPNARAGIKIPCALMGAELPSAEVGGKPFLIKVGKLRGVE
SQGMLCSGRELGLGDDHEGILELPSDAPVGQDIREYLDLDDQIFVIKLTPNKADCLSIMG
MAREVSAITGATLCAPHWTKVSVSIQDKLPVTVEHQDLCGRFAGRVIRGVNPKAQTPDWI
IQRLCHAGQRSISPLVDLSNYVMLEMGQPTHVFDIDKLSGALSVRWARPGESLELLNGQT
VTLVGSDSSGKMQDAGVVADQTGPVALAGIMGGNHCAVTDDTTNIYVEAAYWQPSAIQGR
ARRFNFSTDAAHRFERGVDPQNTVPCLEYLTSLIIEVCGGQAGPVDDQVLAVPERKPVTM
RLARATKVIGIPLTVEIVADVFKRLGFEFKQTAQDVFIVTPPSYRFDIDIEEDLIEEVAR
MYGFENIPDVPPVASLKMSARAEAKRGIHLLRQRCALQGYQEAVNFGFIDLESEQGLAGA
AEKDLIKVLNPIASQYGVMRSNLWGGLLNNLKANLNRGAGRVRLFETGRVFNRNSSVEEI
AGRVAGFDQPQKIGGLAYGSFVPEQWASANRPVDFFDVKGDLARVLDPLQFTTESANHPA
LHPGRSAQIYLISPQGKVVIGSVGELHPALQQIYELPQAPVLFELDLEAIQKLSIPQPEE
LSKFPAVQRDLAVVVKQAVSAQSLMDAMAASKQAFVKGIELFDEFKPKAGSNSMADDEKS
LAFRVTLLNTHETLQDPQIEAVMTALLSALEKKCAARLR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctgaatcttggcttcgtcaatacgtcaatcctgatctagatagtcaggcc
ttaggtcatgccatgactatggcgggtcttgaagtggaagagcaacatgctgttgcgcca
ccatttactaaaattgttgttgctcacattctgtctgctgaactgcatcctgacgctgat
cgtctgcgtgtttgtaaagtagatgtaggtactggtcaagaattgcaaattgtctgtggc
gctccaaatgcgcgtgctggcatcaagatcccttgtgccttaatgggcgctgaactgcct
tctgcagaagtaggtggtaagccatttttaattaaagtaggcaagctccgtggcgttgaa
agccaaggtatgttgtgctcaggtcgtgagctaggcctgggtgatgatcatgaaggtatt
ttggaattaccttcagatgccccagtaggtcaagatattcgcgagtatttagatctggat
gatcagatctttgtcattaagttgacgccaaataaggcggattgcttatcgattatgggt
atggcacgtgaagtgtcagccatcacgggtgctaccttgtgcgcgcctcactggactaag
gtgagcgtatccattcaggataagctaccagtgactgttgagcatcaagatctatgtggt
cgttttgcgggtcgtgtgattcgtggtgtgaatccaaaagcccaaaccccggattggatt
attcagcgtctttgccatgctggccaaagaagcatttctcctttagtcgatctctctaac
tacgtcatgttagaaatggggcagcccacccatgtgtttgatattgataaattaagcggt
gcattatcagtacgctgggctaggcctggcgaaagtcttgagttgctcaatggtcaaact
gtgacccttgtcggctctgattcttctggcaagatgcaggatgccggtgtagtggctgat
caaacaggtccagtagcccttgctggaattatgggcgggaatcactgcgccgtcactgat
gacaccaccaatatttatgttgaagcagcttattggcaaccctcggcaattcagggtcgt
gctcgtcgctttaatttcagcacggatgctgcccatcgctttgagcgtggggttgatcca
caaaataccgtgccttgccttgagtacctgacttctttaattattgaagtttgtggtggc
caggctggtccagtcgatgatcaggtgcttgcagtgccggagcgtaagcctgtcacgatg
cgcttagcgcgcgccacaaaagtcatcggtattccgctgacagtggaaattgttgcagat
gtatttaaacgccttggttttgagtttaaacagacggctcaggatgtatttatcgtgaca
cctcctagctatcgttttgatattgatattgaagaagatttaattgaagaagtcgcccgt
atgtacggctttgaaaatattcccgatgtgcccccagtagcttctttgaagatgagcgct
agggcagaagcaaagcggggtatacatttattgcgccaacgatgcgctctccagggctat
caagaggcggtaaattttggctttattgatttagaaagcgagcaagggcttgctggtgca
gctgaaaaagaccttattaaagtgctgaacccgattgcaagtcaatatggcgtgatgcgg
agcaatctctggggcggcttattgaacaacctaaaggccaatttaaatcgtggcgctggg
cgtgtacgtttatttgaaaccggtcgtgtgtttaaccgtaacagcagtgttgaggagatc
gctggccgtgttgctggttttgatcagccacagaaaattgggggcttggcttatggatcc
ttcgtgccagagcagtgggcaagtgctaataggccagtggatttttttgacgtgaagggt
gatttagcacgggtcctggatccattgcaatttacaactgagtcagctaaccatccagca
ctgcatcctggtcgcagcgctcagatatatctcatcagtcctcaaggcaaagttgtcatt
ggatcggttggtgaattgcatccagcccttcaacaaatttatgaattgccacaagcacca
gttttatttgaattagatttagaggccattcagaaactcagtattccgcagcctgaggaa
ctgagtaagtttcctgcagtgcagcgagatttagcagtggtggtaaagcaggcggtctca
gcacagtctttgatggatgctatggcagccagcaaacaagccttcgtaaagggaatcgag
ctatttgatgaatttaagccaaaggctggctctaatagtatggccgatgatgaaaagagt
ctggctttccgtgttaccttattaaatacccatgaaacattgcaagaccctcaaattgag
gcggtgatgacagctttgctttcagcacttgaaaaaaaatgcgcagctcgcttgcgctag
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