Polynucleobacter antarcticus: DCO16_06755
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Entry
DCO16_06755 CDS
T08332
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pani
Polynucleobacter antarcticus
Pathway
pani02024
Quorum sensing
pani03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCO16_06755
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCO16_06755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pani03019
]
DCO16_06755
03036 Chromosome and associated proteins [BR:
pani03036
]
DCO16_06755
Messenger RNA biogenesis [BR:
pani03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DCO16_06755
Chromosome and associated proteins [BR:
pani03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
DCO16_06755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
SRP14
Gag_p24_C
Motif
Other DBs
NCBI-ProteinID:
QKM62779
UniProt:
A0A6M9PQ97
LinkDB
All DBs
Position
complement(1293502..1293744)
Genome browser
AA seq
80 aa
AA seq
DB search
MNISKTQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESYDQYVILLRNTVTQMVYKHA
ISTIVPARAVEFRTEEPSPA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgaacattagtaaaacccagttactacaagaccccttcctcaatgctttgcgcaaagag
catgtgccagtgtctatttatctagttaatggcatcaagttgcagggcaatattgaatcc
tatgatcagtatgtgattttgttgcgcaataccgtcacccagatggtttacaaacacgcg
atttccactattgttcccgctcgcgctgtggaattccgtacggaagagccaagccctgca
taa
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