KEGG   Polynucleobacter antarcticus: DCO16_06755
Entry
DCO16_06755       CDS       T08332                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pani  Polynucleobacter antarcticus
Pathway
pani02024  Quorum sensing
pani03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pani00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DCO16_06755
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DCO16_06755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pani03019]
    DCO16_06755
   03036 Chromosome and associated proteins [BR:pani03036]
    DCO16_06755
Messenger RNA biogenesis [BR:pani03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DCO16_06755
Chromosome and associated proteins [BR:pani03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    DCO16_06755
SSDB
Motif
Pfam: Hfq Hfq_1 LSM SRP14 Gag_p24_C
Other DBs
NCBI-ProteinID: QKM62779
UniProt: A0A6M9PQ97
LinkDB
Position
complement(1293502..1293744)
AA seq 80 aa
MNISKTQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESYDQYVILLRNTVTQMVYKHA
ISTIVPARAVEFRTEEPSPA
NT seq 243 nt   +upstreamnt  +downstreamnt
atgaacattagtaaaacccagttactacaagaccccttcctcaatgctttgcgcaaagag
catgtgccagtgtctatttatctagttaatggcatcaagttgcagggcaatattgaatcc
tatgatcagtatgtgattttgttgcgcaataccgtcacccagatggtttacaaacacgcg
atttccactattgttcccgctcgcgctgtggaattccgtacggaagagccaagccctgca
taa

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