Polynucleobacter antarcticus: DCO16_08835
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Entry
DCO16_08835 CDS
T08332
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pani
Polynucleobacter antarcticus
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pani03400
]
DCO16_08835
Enzymes [BR:
pani01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
DCO16_08835
DNA repair and recombination proteins [BR:
pani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
DCO16_08835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QKM63149
UniProt:
A0A6M9PR69
LinkDB
All DBs
Position
complement(1702353..1703915)
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AA seq
520 aa
AA seq
DB search
MASKKLAVKNLTVKKLVLILGDQLDINSPILQHIDPKADRLLMVESANEAQHVWSHKARI
ALFLSAMRHFAQQLEGLGLPLLYLKQSSQTIAECLRDQITSGQFNHLVCVEPGEWRLKKA
IEDLATELNITLEMQEDAHFYCSRQEFSQWVANKKELRLEYFYRLMRKTHGILVDPEGNP
EGGQWNFDKDNRKPFPKKGPGLIPAPEWFAPDEITQEVIAEVEERYPDHPGSLAHFQWPV
TRSQALQALEGFVEYRLATFGVHEDAMWTDTPFGWHSLLSSSLNLKLLNPREVIAAVLVA
WKKQDLDLATVEGFIRQILGWREFVRGMYYLDMPQMAEDNFYDHHNALPAWYWTGKTKMR
CMQESIGQTLEYGYAHHIQRLMVTGNFALLAEILPKAVCDWYLAIYVDAIEWVELPNTAG
MALFASGGRFTSKPYIASGAYIKRMSNYCGSCQYKQDVRFGEGACPITNLYWNFLIKHRA
QFDASPRTRLMTVNLSKISAEDQQAIQAHAQTILANLDSL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaaaaagctcgcagttaaaaatctcacagttaaaaagctcgtattaatattg
ggtgatcagctcgatatcaatagccccatacttcaacatatcgatcccaaagcagatcga
ttgctgatggtggagtctgctaatgaggctcagcatgtttggtctcataaggccaggatt
gccttatttttatcagctatgcgccactttgctcagcagttggagggccttggtctgcca
ttgctatatctcaaacaatcttcgcaaacgattgccgagtgcctgagagatcaaatcact
tcaggacaatttaaccacctggtctgtgttgaaccaggagagtggcgcctcaaaaaagcg
attgaagatttagctacagaattaaatatcactttagaaatgcaagaagatgcccatttc
tattgttcacgccaagagttttctcaatgggtggcgaataagaaggagttaaggctggag
tatttttatcgcctgatgcgtaagacccatggaatcttggtagatccagagggtaatcca
gagggagggcagtggaattttgataaagacaatcgcaagccttttcctaaaaaaggtcct
ggcttaattccagcgccggaatggtttgcgccggatgagattacccaagaagtcattgcc
gaggtagaggaacgatatcccgatcacccgggatcattggcgcattttcagtggccggtg
actcgctctcaggcgctacaagccctagaaggttttgtcgagtatcggctagcgaccttt
ggggtgcatgaagatgcaatgtggaccgacaccccttttggatggcattctttattgtct
agctcgctcaatctgaagttactcaatcctcgcgaagtgattgctgctgtattggtggcg
tggaaaaaacaagatttagatctggccacggtagagggatttattcgtcaaattttgggc
tggcgagaatttgtacgcggtatgtattacttagatatgccgcagatggcagaagataac
ttctacgatcatcacaacgcactacctgcttggtattggactggtaagaccaagatgcgt
tgtatgcaagagtcgattggtcaaacactggagtatgggtatgcacaccatattcagcgt
ctgatggtgaccggtaattttgcattgctcgctgaaattctcccaaaagcagtgtgtgat
tggtacttggcaatttatgtcgatgcaattgagtgggtggagttacctaatactgcaggc
atggctttatttgccagtggagggcgctttactagcaagccttacattgctagtggcgca
tacattaaacgtatgagtaattattgtggttcatgtcagtacaaacaggatgttcggttt
ggcgagggtgcatgcccaataacgaatctttattggaactttctcatcaagcatcgagct
cagtttgacgctagtccccgcactaggctgatgacagtcaatttgtccaaaattagcgct
gaggatcaacaagcgattcaggcacatgctcagaccattttggctaatttagactctctg
tag
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